Red clover Marker Database

RCS5101 Information

Marker name RCS5101
Marker category Red_clover_SSR
Primer sequences Fw CCGTGACCCAGGTAAAAAGA
Rv AACATAACCGGACGAGCAAC
EST/Genome sequences BB911602
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG7
Position 79.932
SNP Position
Method
SSR Fragment size 294
Pattern* GGT
Repeat count 15
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5101
Enzyme
Related markers Marker name AP007741, mth2-53f22
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense