Red clover Marker Database

RCS5033 Information

Marker name RCS5033
Marker category Red_clover_SSR
Primer sequences Fw ACAGCAAAATCCCAAACTGG
Rv GTGAGGAGAACAACGCCATT
EST/Genome sequences BB911101
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG3
Position 39.198
SNP Position
Method
SSR Fragment size 269
Pattern* AAG
Repeat count 14
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS5033
Enzyme
Related markers Marker name AP010106, mth2-15m12
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense