Red clover Marker Database

RCS2000 Information

Marker name RCS2000
Marker category Red_clover_SSR
Primer sequences Fw AAGTACCGATGTGGGACTTCA
Rv GGCTTCCTGCAGATGGAATA
EST/Genome sequences DE221444
Lines
PIC Value 0.825206
Lines 48
Map
(HR x R130)
Linkage LG7
Position 51.865
SNP Position
Method
SSR Fragment size 287
Pattern* AAG
Repeat count 43
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS2000
Enzyme
Related markers Marker name AP010318, mth2-9c15
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense