Red clover Marker Database

RCS1999 Information

Marker name RCS1999
Marker category Red_clover_SSR
Primer sequences Fw CCCACCCAAATAAAAACCCT
Rv AAAATCCCCCTCTTCTCTCG
EST/Genome sequences DE221402
Lines
PIC Value 0.7708
Lines 48
Map
(HR x R130)
Linkage LG3
Position 37.688
SNP Position
Method
SSR Fragment size 184
Pattern* AAC
Repeat count 19
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS1999
Enzyme
Related markers Marker name
Species
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense