Red clover Marker Database

RCS1812 Information

Marker name RCS1812
Marker category Red_clover_SSR
Primer sequences Fw TGCCATCATCTGAATCTCTCTC
Rv CCTCTGTAAAATCTTTGCATCA
EST/Genome sequences BB930975
Lines
PIC Value 0.549838
Lines 48
Map
(HR x R130)
Linkage LG1
Position 21.393
SNP Position
Method
SSR Fragment size 90
Pattern* GGAT
Repeat count 15
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS1812
Enzyme
Related markers Marker name AP009996, mth2-50l17
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense