Red clover Marker Database

RCS1679 Information

Marker name RCS1679
Marker category Red_clover_SSR
Primer sequences Fw GAGAAAGAAAAAGTAGCAGAGGAAAA
Rv GGAGCTAGCTTCCGTTTGTG
EST/Genome sequences BB932890
Lines
PIC Value 0.7903
Lines 48
Map
(HR x R130)
Linkage LG3
Position 80.147
SNP Position
Method
SSR Fragment size 107
Pattern* AAG
Repeat count 19
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS1679
Enzyme
Related markers Marker name AP007693, mth2-12b2
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense