Red clover Marker Database

RCS0399 Information

Marker name RCS0399
Marker category Red_clover_SSR
Primer sequences Fw GATTCTGGGAGAAGGTGAAGG
Rv TCCACTATCCACCAACACCA
EST/Genome sequences DE214175
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG2
Position 42.352
SNP Position
Method
SSR Fragment size 185
Pattern* AAG
Repeat count 12
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS0399
Enzyme
Related markers Marker name AP008244, mth2-49f2
Species Lotus japonicus, Medicago truncatula
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense