Red clover Marker Database

RCS0005 Information

Marker name RCS0005
Marker category Red_clover_SSR
Primer sequences Fw TCCAAAGAGAACAAGGAACC
Rv GAAACCGGCGATGAAATTAG
EST/Genome sequences AB234880
Lines
PIC Value
Lines
Map
(HR x R130)
Linkage LG1
Position 43.043
SNP Position
Method
SSR Fragment size 169
Pattern* AAT
Repeat count 15
Method PCR TD
Detection 10% acrylamide
Multiplex
Gel image RCS0005
Enzyme
Related markers Marker name AP010447, mth2-152f22
Species Lotus japonicus, Medicago truncatula
Comments
C165

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


MarkerDB | Trifolium pratense