Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr11

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 277


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES4990 Chr11 150973 1e-134
CaES1102 Chr11 182224 1e-110
CaES3909 Chr11 245031 1e-103
CaES3766 Chr11 1194336 1e-144
CaES3501 Chr11 1202347 1e-113
CaES4412 Chr11 1228983 1e-102
CaES5313 Chr11 1392795 1e-85
CaES5690 Chr11 1555167 3e-33
CaES3240 Chr11 1838940 4e-66
CaES3857 Chr11 2066449 1e-139
CaES0477 Chr11 2271295 2e-57
CaES0418 Chr11 2273940 5e-97
CaES2090 Chr11 2283244 1e-114
CaES3021 Chr11 2337594 2e-64
CaES2892 Chr11 2338151 1e-104
CaES1145 Chr11 2338223 1e-103
CaES2241 Chr11 2788558 1e-85
CaES1071 Chr11 2878075 9e-78
CaES3369 Chr11 2913368 6e-88
CaES4893 Chr11 2947419 1e-129
CaES3356 Chr11 3058731 1e-91
CaES3896 Chr11 3145518 5e-88
CaES4083 Chr11 3549509 2e-68
CaES1376 Chr11 3576397 4e-74
CaES5274 Chr11 3672096 1e-92
CaES5251 Chr11 3681383 2e-86
CaES3270 Chr11 3732453 2e-45
CaES4099 Chr11 3750273 3e-67
CaES4681 Chr11 3768653 5e-88
CaES1033 Chr11 3808084 1e-128
CaES4332 Chr11 3859788 4e-90
CaES0482 Chr11 3987913 1e-71
CaES1015 Chr11 4062791 4e-51
CaES5103 Chr11 4350261 1e-121
CaES5007 Chr11 4405919 1e-120
CaES3347 Chr11 4435983 1e-146
CaES3678 Chr11 4481113 1e-109
CaES3982 Chr11 4855443 1e-109
CaES2222 Chr11 5076478 3e-45
CaES2208 Chr11 5076853 1e-104
CaES1587 Chr11 5258129 5e-39
CaES0922 Chr11 5287740 1e-101
CaES4898 Chr11 5291147 1e-84
CaES0452 Chr11 5318015 1e-116
CaES4810 Chr11 5351520 1e-118
CaES3282 Chr11 5513875 1e-100
CaES5666 Chr11 5761216 1e-59
CaES1431 Chr11 6058810 5e-70
CaES3828 Chr11 6066545 1e-126
CaES2424 Chr11 6077331 1e-123
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 277


MarkerDB | Capsicum annuum