Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0002 Chr09 26269538 3e-61
CaES0015 Chr09 892002 7e-92
CaES0031 Chr09 92667474 7e-39
CaES0044 Chr09 133157394 1e-105
CaES0084 Chr09 732362 2e-70
CaES0091 Chr09 116825117 1e-104
CaES0100 Chr09 218464663 1e-124
CaES0140 Chr09 7016839 4e-89
CaES0167 Chr09 9440129 1e-106
CaES0177 Chr09 228773256 1e-23
CaES0178 Chr09 236481810 4e-97
CaES0180 Chr09 5549738 1e-106
CaES0190 Chr09 142414074 1e-133
CaES0194 Chr09 234471852 5e-72
CaES0207 Chr09 9792795 2e-92
CaES0252 Chr09 237692509 4e-36
CaES0259 Chr09 228926333 7e-44
CaES0268 Chr09 213773492 1e-91
CaES0283 Chr09 93957284 2e-97
CaES0289 Chr09 237956216 1e-100
CaES0315 Chr09 132573258 1e-41
CaES0326 Chr09 9472196 4e-85
CaES0334 Chr09 5350403 1e-102
CaES0336 Chr09 51953977 1e-110
CaES0338 Chr09 171898181 1e-123
CaES0373 Chr09 151424616 4e-97
CaES0379 Chr09 180991755 1e-119
CaES0400 Chr09 238688616 1e-124
CaES0409 Chr09 11658407 3e-80
CaES0432 Chr09 8790402 3e-63
CaES0435 Chr09 5466870 1e-124
CaES0468 Chr09 220432595 5e-89
CaES0481 Chr09 38526542 6e-78
CaES0485 Chr09 234592038 1e-111
CaES0487 Chr09 1522769 1e-100
CaES0504 Chr09 213519691 4e-91
CaES0510 Chr09 237694644 5e-60
CaES0511 Chr09 222057147 2e-49
CaES0568 Chr09 229427468 7e-87
CaES0575 Chr09 182274167 7e-96
CaES0580 Chr09 193009145 1e-134
CaES0618 Chr09 178404724 1e-127
CaES0623 Chr09 226906285 7e-93
CaES0639 Chr09 235088693 3e-48
CaES0703 Chr09 213622235 7e-84
CaES0708 Chr09 233420848 1e-100
CaES0714 Chr09 164318481 6e-88
CaES0723 Chr09 236522367 1e-143
CaES0734 Chr09 1053345 9e-42
CaES0741 Chr09 20886739 1e-111
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282


MarkerDB | Capsicum annuum