Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0044 Chr09 133157394 1e-105
CaES3720 Chr09 134627845 2e-53
CaES3097 Chr09 134628189 1e-124
CaES5363 Chr09 136758462 1e-124
CaES0854 Chr09 137622854 1e-109
CaES0190 Chr09 142414074 1e-133
CaES0373 Chr09 151424616 4e-97
CaES3583 0.0 0 Chr09 152329579 1e-115
CaES3450 Chr09 155055134 1e-153
CaES4219 Chr09 157851160 5e-79
CaES1016 Chr09 160980199 2e-75
CaES1730 Chr09 163068421 1e-150
CaES0714 Chr09 164318481 6e-88
CaES3309 Chr09 165458971 1e-110
CaES4349 Chr09 166196719 4e-89
CaES1066 Chr09 168500950 2e-72
CaES2581 Chr09 168744154 1e-138
CaES5460 Chr09 169597090 6e-53
CaES0338 Chr09 171898181 1e-123
CaES3656 Chr09 172536558 1e-139
CaES3581 Chr09 172956456 1e-103
CaES1043 Chr09 172958109 1e-164
CaES2917 Chr09 173928561 1e-145
CaES4290 Chr09 178361571 5e-93
CaES0618 Chr09 178404724 1e-127
CaES3800 Chr09 178664957 1e-122
CaES2081 Chr09 178916123 1e-89
CaES0379 Chr09 180991755 1e-119
CaES1054 Chr09 181008254 1e-125
CaES3665 Chr09 182206681 1e-106
CaES0575 Chr09 182274167 7e-96
CaES0794 Chr09 183970101 1e-121
CaES3346 Chr09 184390433 8e-52
CaES5389 Chr09 185252497 1e-51
CaES4055 Chr09 185253088 1e-145
CaES2534 Chr09 188162034 1e-128
CaES4064 Chr09 188162642 2e-33
CaES4326 Chr09 190170309 1e-132
CaES2414 Chr09 190269455 1e-117
CaES1678 Chr09 190892825 1e-98
CaES1151 Chr09 192219861 1e-100
CaES0580 Chr09 193009145 1e-134
CaES5159 Chr09 197582254 7e-21
CaES4102 Chr09 198369384 1e-75
CaES5228 Chr09 198371870 4e-90
CaES5208 Chr09 198501794 1e-94
CaES2611 Chr09 198885587 1e-147
CaES3734 Chr09 199537563 1e-111
CaES1660 Chr09 202087972 1e-112
CaES2975 Chr09 203754396 1e-155
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

MarkerDB | Capsicum annuum