Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1993 Chr09 218318646 1e-110
CaES2005 Chr09 221009876 4e-72
CaES2048 Chr09 95826395 1e-65
CaES2080 Chr09 219560346 6e-98
CaES2081 Chr09 178916123 1e-89
CaES2093 Chr09 65569829 1e-129
CaES2126 Chr09 10027382 1e-83
CaES2158 Chr09 226842662 1e-125
CaES2175 Chr09 235513033 1e-68
CaES2182 Chr09 83593363 1e-135
CaES2213 Chr09 235127071 3e-27
CaES2215 Chr09 12109454 2e-78
CaES2227 Chr09 5819281 2e-94
CaES2234 Chr09 5753290 1e-121
CaES2270 Chr09 114115752 1e-100
CaES2273 Chr09 86069492 1e-132
CaES2275 Chr09 4857253 8e-74
CaES2328 Chr09 51429170 1e-147
CaES2350 Chr09 746951 7e-33
CaES2369 Chr09 130762308 2e-93
CaES2381 Chr09 213453657 1e-111
CaES2395 Chr09 237356188 7e-85
CaES2405 Chr09 234471833 4e-35
CaES2414 Chr09 190269455 1e-117
CaES2445 Chr09 5034572 4e-27
CaES2461 Chr09 6475761 6e-93
CaES2463 Chr09 59422979 1e-33
CaES2468 Chr09 6734002 6e-21
CaES2490 Chr09 236725647 1e-54
CaES2529 Chr09 5038224 2e-43
CaES2534 Chr09 188162034 1e-128
CaES2547 Chr09 15544984 2e-92
CaES2569 Chr09 213543898 6e-96
CaES2581 Chr09 168744154 1e-138
CaES2589 Chr09 49971787 5e-89
CaES2611 Chr09 198885587 1e-147
CaES2638 Chr09 233421458 1e-118
CaES2646 Chr09 210753828 1e-100
CaES2647 Chr09 7398878 1e-138
CaES2668 Chr09 1102776 1e-152
CaES2670 Chr09 8012048 6e-73
CaES2673 Chr09 12014750 1e-125
CaES2700 Chr09 11222601 6e-78
CaES2719 Chr09 6034533 8e-76
CaES2776 Chr09 227438881 1e-135
CaES2817 Chr09 19673310 5e-88
CaES2841 Chr09 42246162 1e-89
CaES2852 Chr09 218707679 1e-104
CaES2867 Chr09 54215642 5e-83
CaES2917 Chr09 173928561 1e-145
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

MarkerDB | Capsicum annuum