Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES3654 Chr09 7398476 3e-88
CaES2647 Chr09 7398878 1e-138
CaES0968 Chr09 7574223 1e-122
CaES4957 Chr09 7636545 2e-99
CaES5350 Chr09 7658846 1e-110
CaES1025 Chr09 7680897 1e-104
CaES2670 Chr09 8012048 6e-73
CaES3147 Chr09 8037453 1e-106
CaES0432 Chr09 8790402 3e-63
CaES5521 Chr09 9387471 5e-65
CaES0167 Chr09 9440129 1e-106
CaES0326 Chr09 9472196 4e-85
CaES0207 Chr09 9792795 2e-92
CaES4366 Chr09 9935252 8e-77
CaES2126 Chr09 10027382 1e-83
CaES4183 Chr09 10126479 1e-113
CaES1425 Chr09 10485503 9e-73
CaES4003 Chr09 10932400 6e-90
CaES4292 Chr09 10932541 1e-102
CaES4143 Chr09 10936839 3e-87
CaES2700 Chr09 11222601 6e-78
CaES1199 Chr09 11399922 5e-86
CaES0409 Chr09 11658407 3e-80
CaES4889 Chr09 11801074 1e-107
CaES3710 Chr09 11968108 1e-132
CaES2673 Chr09 12014750 1e-125
CaES4680 Chr09 12072093 2e-67
CaES1127 Chr09 12109412 2e-84
CaES2215 Chr09 12109454 2e-78
CaES3763 Chr09 14403555 1e-109
CaES4841 Chr09 15404149 2e-43
CaES2547 Chr09 15544984 2e-92
CaES1894 Chr09 15564440 3e-60
CaES1441 Chr09 15691812 1e-124
CaES3912 Chr09 15797372 1e-105
CaES3353 Chr09 19005571 8e-71
CaES2817 Chr09 19673310 5e-88
CaES4380 Chr09 20747751 1e-104
CaES0741 Chr09 20886739 1e-111
CaES5378 Chr09 21115404 1e-33
CaES4851 Chr09 21171926 3e-95
CaES1916 Chr09 23165303 1e-140
CaES3623 Chr09 23586677 1e-107
CaES1023 Chr09 24427778 1e-146
CaES3790 Chr09 25215108 3e-78
CaES5436 Chr09 25318082 5e-46
CaES1657 Chr09 25611359 7e-55
CaES0002 Chr09 26269538 3e-61
CaES5744 Chr09 28913052 7e-77
CaES4638 Chr09 29550480 4e-74
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282


MarkerDB | Capsicum annuum