Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr08

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 436


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES1324 0.0 190 Chr08 43902749 1e-114
CaES3612 0.0 192 Chr08 62012326 1e-162
CaES1051 0.0 191 Chr08 112384266 1e-142
CaES3453 0.0 0 Chr08 130616337 5e-82
CaES3862 0.17 192 Chr08 1915486 1e-143
CaES5301 0.432 188 Chr08 153131324 8e-77
CaES4410 0.498 191 Chr08 87420257 1e-111
CaES1490 Chr08 35745 5e-76
CaES4629 Chr08 42899 1e-74
CaES0950 Chr08 43279 3e-85
CaES1354 Chr08 53875 1e-113
CaES2066 Chr08 102255 7e-91
CaES5639 Chr08 526957 1e-102
CaES2599 Chr08 660250 1e-130
CaES2274 Chr08 732088 1e-111
CaES4397 Chr08 733753 1e-88
CaES1575 Chr08 822757 6e-46
CaES3579 Chr08 904094 1e-139
CaES3761 Chr08 904328 1e-85
CaES5009 Chr08 996804 1e-109
CaES4117 Chr08 1101060 8e-63
CaES1559 Chr08 1151657 9e-52
CaES4564 Chr08 1151675 1e-118
CaES1992 Chr08 1165821 1e-119
CaES4937 Chr08 1185876 1e-127
CaES3689 Chr08 1221090 1e-138
CaES1394 Chr08 1253320 1e-150
CaES4719 Chr08 1542326 1e-81
CaES0398 Chr08 1790998 7e-97
CaES0054 Chr08 2020267 1e-116
CaES3487 Chr08 2304145 1e-126
CaES0128 Chr08 2309304 1e-113
CaES4953 Chr08 2309335 1e-138
CaES3602 Chr08 6660365 1e-138
CaES4928 Chr08 6664162 2e-64
CaES3747 Chr08 6705462 1e-149
CaES2573 Chr08 8392653 2e-78
CaES4106 Chr08 11595351 4e-91
CaES4169 Chr08 15995038 1e-107
CaES1558 Chr08 18419768 1e-53
CaES0185 Chr08 22045907 1e-127
CaES4432 Chr08 24941540 1e-146
CaES2183 Chr08 28608033 1e-118
CaES4816 Chr08 29497286 5e-63
CaES3327 Chr08 36266415 1e-110
CaES0687 Chr08 36266932 2e-95
CaES2937 Chr08 43943134 1e-102
CaES4390 Chr08 48903893 5e-83
CaES3539 Chr08 49009759 1e-74
CaES2857 Chr08 52709327 2e-37
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 436


MarkerDB | Capsicum annuum