Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr07

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 349


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5549 Chr07 444396 2e-35
CaES0497 Chr07 1506305 3e-93
CaES2294 Chr07 1543921 2e-62
CaES5356 Chr07 1610040 1e-106
CaES3963 Chr07 1761114 6e-86
CaES0271 Chr07 1766545 1e-79
CaES1309 Chr07 1779172 6e-63
CaES0538 Chr07 1827693 1e-82
CaES4029 Chr07 1835857 1e-74
CaES2788 Chr07 1839504 1e-140
CaES0126 Chr07 3883983 1e-104
CaES3428 Chr07 3884133 2e-59
CaES1473 Chr07 4093274 9e-87
CaES3200 Chr07 4093301 3e-60
CaES3180 Chr07 4093352 8e-70
CaES4025 Chr07 4130574 5e-42
CaES0594 Chr07 4131256 2e-80
CaES0550 Chr07 4172877 1e-140
CaES0698 Chr07 4253781 1e-129
CaES2883 Chr07 4346102 1e-124
CaES0636 Chr07 4454895 1e-79
CaES3764 Chr07 4653102 1e-125
CaES0954 Chr07 5214487 6e-51
CaES5664 Chr07 5214604 8e-48
CaES3183 Chr07 5307506 2e-75
CaES3182 Chr07 5307543 7e-83
CaES3185 Chr07 5307911 1e-87
CaES3167 Chr07 5307913 3e-77
CaES4163 Chr07 5633161 1e-99
CaES5156 Chr07 5677688 5e-88
CaES2884 Chr07 5961980 1e-128
CaES3536 Chr07 6004432 1e-121
CaES4675 Chr07 6019979 9e-98
CaES2211 Chr07 7173569 2e-89
CaES4089 Chr07 7250640 7e-71
CaES2257 Chr07 7262896 5e-27
CaES0597 Chr07 7270347 1e-126
CaES1506 Chr07 7934995 3e-86
CaES0235 Chr07 8132416 3e-47
CaES2592 Chr07 8906270 7e-75
CaES2324 Chr07 8911499 1e-112
CaES0992 Chr07 9153863 3e-34
CaES0944 Chr07 9224108 1e-125
CaES0869 Chr07 9230653 1e-98
CaES0755 Chr07 9248685 1e-119
CaES2123 Chr07 9268824 1e-127
CaES5518 Chr07 9281823 2e-57
CaES2252 0.011 187 Chr07 9324451 1e-128
CaES5262 Chr07 9462947 1e-66
CaES3017 Chr07 9530797 4e-36
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 349

MarkerDB | Capsicum annuum