Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0036 Chr06 4873541 1e-128
CaES0055 Chr06 217999211 1e-112
CaES0060 Chr06 11210368 9e-90
CaES0088 Chr06 1897444 1e-123
CaES0116 Chr06 20043153 1e-126
CaES0118 Chr06 16475130 1e-111
CaES0137 Chr06 40535010 1e-129
CaES0145 Chr06 218211350 4e-60
CaES0146 Chr06 80562792 1e-51
CaES0153 Chr06 3784350 2e-93
CaES0165 Chr06 9225524 8e-72
CaES0197 Chr06 33156421 2e-86
CaES0237 Chr06 33350788 1e-118
CaES0241 Chr06 19489589 1e-125
CaES0247 Chr06 16868681 1e-120
CaES0249 Chr06 18391956 1e-104
CaES0253 Chr06 216513236 1e-105
CaES0260 Chr06 914998 3e-79
CaES0276 Chr06 154479580 1e-120
CaES0287 Chr06 320121 1e-103
CaES0291 Chr06 2999294 5e-87
CaES0292 Chr06 161202607 1e-122
CaES0304 Chr06 7206685 1e-111
CaES0333 Chr06 7100530 1e-114
CaES0349 Chr06 33527180 1e-101
CaES0356 Chr06 70918210 1e-117
CaES0358 Chr06 133765426 1e-132
CaES0401 Chr06 8474894 1e-113
CaES0458 Chr06 23399913 4e-95
CaES0461 Chr06 1581612 2e-91
CaES0499 Chr06 12463931 1e-29
CaES0508 Chr06 11315561 1e-107
CaES0509 Chr06 24808546 9e-92
CaES0561 Chr06 70404585 1e-107
CaES0589 Chr06 23143790 1e-123
CaES0592 Chr06 4772227 1e-107
CaES0604 Chr06 22734052 1e-48
CaES0622 Chr06 25994545 6e-88
CaES0634 Chr06 38928583 1e-108
CaES0642 Chr06 193948668 1e-113
CaES0647 Chr06 22438742 6e-87
CaES0655 Chr06 51690916 1e-106
CaES0676 Chr06 2667925 1e-33
CaES0680 Chr06 5436033 1e-122
CaES0699 Chr06 109163680 1e-118
CaES0702 Chr06 216468163 1e-110
CaES0715 Chr06 47023389 1e-127
CaES0719 Chr06 4420209 1e-120
CaES0766 Chr06 11274508 1e-166
CaES0804 Chr06 216075479 1e-101
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum