Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5655 Chr06 208093130 1e-103
CaES5676 Chr06 9687933 2e-70
CaES5687 Chr06 29241293 1e-143
CaES5701 Chr06 770925 1e-89
CaES5710 Chr06 19263769 2e-73
CaES5715 Chr06 15338332 5e-95
CaES5716 Chr06 170264015 6e-88
CaES5722 Chr06 13483823 2e-81
CaES5723 Chr06 5273770 1e-108
CaES5730 Chr06 17087968 5e-90
CaES5732 Chr06 16863471 3e-51
CaES5741 Chr06 3240113 2e-39
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum