Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES4317 Chr06 218018088 1e-119
CaES4325 Chr06 16967222 4e-95
CaES4372 Chr06 50111570 1e-107
CaES4374 Chr06 54687 1e-126
CaES4375 Chr06 64221435 1e-139
CaES4382 Chr06 37661191 1e-138
CaES4391 Chr06 211015632 1e-108
CaES4408 Chr06 3013990 2e-58
CaES4499 Chr06 163156708 2e-85
CaES4504 0.0 191 Chr06 81225306 1e-112
CaES4512 Chr06 129965625 1e-134
CaES4529 Chr06 47812936 7e-80
CaES4538 Chr06 10100662 1e-106
CaES4554 Chr06 11229961 3e-95
CaES4560 Chr06 214587739 1e-148
CaES4570 Chr06 38202297 1e-121
CaES4577 Chr06 182055668 2e-89
CaES4599 Chr06 31615558 2e-90
CaES4624 Chr06 38167207 1e-125
CaES4626 Chr06 17199420 1e-127
CaES4642 Chr06 156872252 4e-90
CaES4666 0.14 192 Chr06 24336006 1e-154
CaES4676 Chr06 201279695 8e-85
CaES4678 Chr06 2320151 1e-101
CaES4687 Chr06 3174477 1e-147
CaES4712 Chr06 23144780 1e-129
CaES4723 Chr06 37456504 1e-40
CaES4758 Chr06 10592517 1e-133
CaES4761 Chr06 166737842 1e-96
CaES4783 Chr06 36555629 1e-120
CaES4788 Chr06 138645013 2e-89
CaES4823 Chr06 4124927 2e-84
CaES4825 Chr06 6678729 3e-96
CaES4832 Chr06 47946984 2e-48
CaES4853 Chr06 1262968 1e-127
CaES4854 Chr06 38080525 1e-122
CaES4859 Chr06 22775121 1e-111
CaES4876 Chr06 155943130 1e-151
CaES4877 Chr06 216054162 1e-58
CaES4895 Chr06 169366770 1e-101
CaES4903 Chr06 102099942 1e-108
CaES4911 Chr06 16671122 1e-108
CaES4912 Chr06 81150144 1e-105
CaES4916 Chr06 117860396 1e-111
CaES4948 Chr06 18393502 3e-76
CaES4964 Chr06 10220167 1e-137
CaES4965 Chr06 1201010 1e-147
CaES4993 Chr06 1200428 1e-106
CaES4997 Chr06 95404251 1e-142
CaES5020 Chr06 8611997 1e-168
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum