Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2385 Chr06 16874839 1e-133
CaES1516 Chr06 16883781 2e-70
CaES3762 Chr06 16920535 1e-132
CaES4325 Chr06 16967222 4e-95
CaES2686 Chr06 16996029 1e-119
CaES3866 Chr06 17087611 7e-93
CaES5730 Chr06 17087968 5e-90
CaES4626 Chr06 17199420 1e-127
CaES2628 Chr06 17519950 1e-87
CaES5182 Chr06 17617398 1e-107
CaES2276 Chr06 17674436 1e-90
CaES0249 Chr06 18391956 1e-104
CaES4948 Chr06 18393502 3e-76
CaES1284 Chr06 19032448 1e-120
CaES3052 Chr06 19261391 1e-137
CaES5710 Chr06 19263769 2e-73
CaES2331 Chr06 19482623 3e-66
CaES0241 Chr06 19489589 1e-125
CaES0116 Chr06 20043153 1e-126
CaES3218 Chr06 20212181 1e-148
CaES3649 Chr06 20224109 1e-130
CaES3641 Chr06 20255791 1e-135
CaES1128 Chr06 20341090 1e-144
CaES3064 Chr06 20362303 5e-57
CaES3831 Chr06 20375920 1e-132
CaES1297 Chr06 20435950 1e-153
CaES5380 Chr06 20699319 6e-40
CaES4309 Chr06 20699718 1e-87
CaES1692 Chr06 22118247 1e-106
CaES1724 Chr06 22130177 3e-80
CaES4228 Chr06 22133478 1e-107
CaES0647 Chr06 22438742 6e-87
CaES5354 Chr06 22685439 8e-86
CaES0604 Chr06 22734052 1e-48
CaES4859 Chr06 22775121 1e-111
CaES0589 Chr06 23143790 1e-123
CaES4712 Chr06 23144780 1e-129
CaES3246 Chr06 23147806 8e-55
CaES1802 Chr06 23230709 1e-135
CaES0458 Chr06 23399913 4e-95
CaES2503 Chr06 24312862 5e-45
CaES5359 Chr06 24534542 1e-107
CaES0509 Chr06 24808546 9e-92
CaES3206 Chr06 25126364 1e-122
CaES3284 Chr06 25126927 1e-100
CaES3712 Chr06 25258446 2e-50
CaES3108 Chr06 25264821 6e-79
CaES2620 Chr06 25284038 7e-83
CaES5420 Chr06 25294275 3e-43
CaES3812 Chr06 25672751 1e-144
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum