Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr06

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 412


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2056 Chr06 169126840 1e-116
CaES2084 Chr06 54030901 1e-133
CaES2110 Chr06 2283368 3e-97
CaES2139 Chr06 55339681 1e-133
CaES2147 Chr06 12491782 1e-71
CaES2161 Chr06 10118852 3e-74
CaES2165 Chr06 1855897 1e-107
CaES2179 Chr06 4353584 1e-137
CaES2186 Chr06 35454772 1e-110
CaES2202 Chr06 5567291 5e-96
CaES2256 Chr06 63330865 1e-106
CaES2269 Chr06 16863546 1e-102
CaES2276 Chr06 17674436 1e-90
CaES2279 Chr06 9513362 1e-126
CaES2291 Chr06 195648593 1e-111
CaES2299 Chr06 3325858 4e-92
CaES2316 Chr06 218054938 1e-108
CaES2317 Chr06 9809760 1e-114
CaES2321 Chr06 28439769 1e-136
CaES2327 Chr06 46963202 1e-105
CaES2331 Chr06 19482623 3e-66
CaES2337 Chr06 9403023 2e-66
CaES2340 Chr06 329312 1e-44
CaES2341 0.0 192 Chr06 141250753 1e-123
CaES2378 Chr06 39079176 1e-92
CaES2385 Chr06 16874839 1e-133
CaES2412 Chr06 135890836 1e-102
CaES2415 Chr06 80211790 1e-114
CaES2475 Chr06 32750554 2e-71
CaES2484 Chr06 30880140 4e-57
CaES2494 Chr06 9086990 2e-34
CaES2503 Chr06 24312862 5e-45
CaES2517 Chr06 8019100 2e-66
CaES2522 Chr06 143964720 1e-110
CaES2556 Chr06 9513620 1e-122
CaES2584 0.11 189 Chr06 20024931 4e-90
CaES2609 Chr06 215804929 1e-127
CaES2620 Chr06 25284038 7e-83
CaES2628 Chr06 17519950 1e-87
CaES2643 Chr06 48940261 1e-117
CaES2644 Chr06 13024909 1e-122
CaES2659 Chr06 80680679 1e-105
CaES2662 Chr06 81192850 1e-132
CaES2669 Chr06 1968258 1e-119
CaES2672 Chr06 2628382 1e-113
CaES2686 Chr06 16996029 1e-119
CaES2694 Chr06 50698444 9e-93
CaES2703 Chr06 90576089 1e-142
CaES2720 Chr06 25758891 1e-123
CaES2730 Chr06 193670785 6e-75
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 412

MarkerDB | Capsicum annuum