Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES2854 0.0 190 Chr05 131540388 1e-156
CaES3524 0.0 192 Chr05 120996 1e-127
CaES2332 0.476 192 Chr05 570508 1e-137
CaES3447 0.0 192 Chr05 84991656 1e-149
CaES2010 Chr05 129023 1e-151
CaES0738 Chr05 320510 1e-104
CaES2135 Chr05 566544 1e-137
CaES2360 Chr05 617719 5e-60
CaES0205 Chr05 630672 1e-81
CaES4844 Chr05 643693 1e-87
CaES1709 Chr05 796019 8e-55
CaES4241 Chr05 825514 1e-112
CaES3154 Chr05 839334 1e-141
CaES5005 Chr05 897689 1e-138
CaES5308 Chr05 901330 8e-96
CaES4901 Chr05 926202 1e-116
CaES2565 Chr05 942938 7e-87
CaES0080 Chr05 1394192 1e-141
CaES3067 Chr05 1469014 1e-113
CaES0914 Chr05 1482055 1e-120
CaES1896 Chr05 1485457 1e-130
CaES5237 Chr05 1586506 6e-76
CaES0327 Chr05 1587182 1e-101
CaES2043 Chr05 1714220 4e-74
CaES5559 Chr05 1735219 8e-38
CaES0129 Chr05 1775752 6e-55
CaES0641 Chr05 1827772 1e-126
CaES3525 Chr05 1893136 1e-107
CaES5365 Chr05 1914397 1e-102
CaES1358 Chr05 2145218 1e-139
CaES1286 Chr05 2185197 1e-126
CaES0233 Chr05 2506051 1e-138
CaES0099 Chr05 2508479 5e-95
CaES2539 Chr05 2646426 7e-40
CaES0135 Chr05 2704716 3e-49
CaES2440 Chr05 2743599 1e-118
CaES3833 Chr05 2749645 1e-90
CaES4013 Chr05 2798111 1e-118
CaES4537 Chr05 2917900 8e-88
CaES2192 Chr05 3196790 1e-134
CaES2860 Chr05 3318933 9e-72
CaES0148 Chr05 3904838 1e-135
CaES0890 Chr05 5496373 4e-44
CaES0817 Chr05 5501145 1e-70
CaES2012 Chr05 5512600 1e-153
CaES2763 Chr05 5990578 1e-128
CaES1676 Chr05 6370571 1e-100
CaES1758 Chr05 6636743 1e-100
CaES2069 Chr05 6746486 1e-98
CaES4262 Chr05 6908741 1e-128
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312


MarkerDB | Capsicum annuum