Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5477 Chr05 217199965 3e-92
CaES5497 Chr05 195390175 2e-63
CaES5559 Chr05 1735219 8e-38
CaES5569 Chr05 189444689 6e-51
CaES5577 Chr05 214870103 8e-80
CaES5602 Chr05 8872770 1e-125
CaES5613 Chr05 10735880 1e-137
CaES5621 Chr05 193492453 1e-104
CaES5648 Chr05 87608977 6e-79
CaES5669 Chr05 81680038 3e-89
CaES5673 Chr05 214936288 1e-90
CaES5686 Chr05 172596235 2e-97
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312

MarkerDB | Capsicum annuum