Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 312


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2426 Chr05 200423907 7e-90
CaES0328 Chr05 200423907 3e-89
CaES4884 Chr05 200497645 1e-59
CaES0571 Chr05 200788858 1e-118
CaES3365 Chr05 200900276 7e-89
CaES4693 Chr05 200902537 1e-59
CaES2071 Chr05 201120630 1e-105
CaES2472 Chr05 202346119 1e-95
CaES2097 Chr05 202757326 1e-119
CaES1470 Chr05 202771818 3e-46
CaES1635 Chr05 202841708 3e-59
CaES1939 Chr05 202944772 1e-122
CaES3257 Chr05 202975532 1e-123
CaES2400 Chr05 204663372 2e-98
CaES0591 Chr05 204663674 1e-114
CaES5127 Chr05 204734071 1e-129
CaES5315 Chr05 205017275 4e-73
CaES5099 Chr05 205816739 1e-140
CaES2630 Chr05 205877906 1e-146
CaES2057 Chr05 205877941 1e-167
CaES1986 Chr05 206242291 1e-101
CaES3466 Chr05 206380969 1e-135
CaES2603 Chr05 206435363 1e-142
CaES2832 Chr05 206465668 1e-122
CaES4231 Chr05 206537536 1e-121
CaES5011 Chr05 206640218 1e-92
CaES5316 Chr05 207626768 1e-57
CaES2379 Chr05 208949563 1e-49
CaES1078 Chr05 209147646 7e-98
CaES3089 Chr05 209436351 7e-82
CaES1369 Chr05 210956453 1e-108
CaES2908 Chr05 214446857 1e-103
CaES3348 Chr05 214447486 7e-63
CaES3271 Chr05 214470413 1e-100
CaES5396 Chr05 214488835 4e-84
CaES4998 Chr05 214550539 2e-81
CaES0302 Chr05 214609076 1e-111
CaES5577 Chr05 214870103 8e-80
CaES0828 Chr05 214914531 1e-79
CaES1449 Chr05 214920938 1e-110
CaES5673 Chr05 214936288 1e-90
CaES1918 Chr05 214952695 1e-111
CaES2507 Chr05 215203473 6e-62
CaES1266 Chr05 215215284 3e-88
CaES3371 Chr05 215464319 1e-74
CaES3933 Chr05 215968139 1e-139
CaES0779 Chr05 216174156 1e-115
CaES2305 Chr05 216259967 4e-84
CaES2642 Chr05 216314859 1e-101
CaES1163 Chr05 216526446 1e-123
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 312

MarkerDB | Capsicum annuum