Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 360


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0014 Chr04 201230542 1e-80
CaES0017 Chr04 30326162 2e-63
CaES0026 Chr04 193684408 3e-86
CaES0050 Chr04 9357401 1e-145
CaES0070 Chr04 158375306 2e-33
CaES0071 Chr04 205166055 1e-113
CaES0076 Chr04 182259225 1e-54
CaES0101 Chr04 24493637 1e-111
CaES0105 Chr04 212988751 1e-110
CaES0134 Chr04 30730556 1e-111
CaES0136 Chr04 23406124 5e-96
CaES0152 Chr04 213771154 1e-123
CaES0161 Chr04 37065837 2e-95
CaES0186 Chr04 8851073 2e-99
CaES0188 Chr04 12459706 2e-84
CaES0198 Chr04 214594330 1e-112
CaES0210 Chr04 191132210 1e-104
CaES0216 Chr04 8976370 2e-77
CaES0242 Chr04 55144039 7e-92
CaES0280 Chr04 4117646 1e-131
CaES0285 Chr04 211859181 1e-113
CaES0319 Chr04 4076552 1e-116
CaES0325 Chr04 142346759 3e-58
CaES0335 Chr04 5255811 1e-74
CaES0341 Chr04 8344608 1e-114
CaES0348 Chr04 8929543 3e-71
CaES0359 Chr04 205358142 1e-104
CaES0382 Chr04 13901048 1e-124
CaES0390 Chr04 74666253 8e-95
CaES0396 Chr04 192897019 1e-133
CaES0427 Chr04 22261382 1e-119
CaES0438 Chr04 8614728 1e-120
CaES0447 Chr04 8482341 1e-109
CaES0471 Chr04 5717383 1e-140
CaES0479 Chr04 16322831 1e-80
CaES0519 Chr04 8474044 1e-109
CaES0520 Chr04 27320818 1e-60
CaES0560 Chr04 68475772 2e-21
CaES0570 Chr04 27693771 3e-43
CaES0648 Chr04 10338078 1e-125
CaES0654 Chr04 158375828 1e-116
CaES0685 Chr04 8986151 1e-110
CaES0693 Chr04 204806042 1e-116
CaES0728 Chr04 15472581 1e-153
CaES0781 Chr04 499990 1e-110
CaES0795 Chr04 67591055 3e-65
CaES0831 Chr04 22272421 2e-78
CaES0832 Chr04 18373128 5e-29
CaES0834 Chr04 2131503 8e-88
CaES0839 Chr04 5253041 3e-51
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 360

MarkerDB | Capsicum annuum