Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 360


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0136 Chr04 23406124 5e-96
CaES4371 Chr04 23582505 4e-76
CaES1205 Chr04 23920475 3e-90
CaES4744 Chr04 23920985 4e-86
CaES0884 Chr04 23921553 1e-111
CaES5311 Chr04 24415542 2e-79
CaES0101 Chr04 24493637 1e-111
CaES5337 Chr04 25997296 1e-106
CaES3320 Chr04 26073826 5e-59
CaES0520 Chr04 27320818 1e-60
CaES0570 Chr04 27693771 3e-43
CaES3155 Chr04 27743780 1e-147
CaES0917 Chr04 28051395 1e-116
CaES2318 Chr04 28441905 4e-64
CaES3651 Chr04 29343183 2e-41
CaES4627 Chr04 29344699 1e-105
CaES0017 Chr04 30326162 2e-63
CaES3855 Chr04 30491821 1e-119
CaES4914 Chr04 30729613 1e-138
CaES0134 Chr04 30730556 1e-111
CaES5063 Chr04 31345343 1e-124
CaES3274 Chr04 31837934 5e-62
CaES4330 Chr04 31848132 1e-134
CaES3454 Chr04 32792260 1e-120
CaES2077 Chr04 32793654 2e-96
CaES1213 Chr04 33069785 1e-121
CaES4181 Chr04 33081350 1e-109
CaES1424 Chr04 36800051 1e-140
CaES0161 Chr04 37065837 2e-95
CaES5102 Chr04 37748992 1e-85
CaES3951 Chr04 37848282 1e-113
CaES1616 Chr04 38252077 2e-88
CaES3943 Chr04 39062086 7e-88
CaES1979 Chr04 39991350 1e-135
CaES3535 Chr04 41255690 3e-99
CaES2201 Chr04 41256347 1e-106
CaES3901 Chr04 41652505 5e-88
CaES5170 Chr04 42148504 1e-64
CaES5196 Chr04 42616312 1e-132
CaES5410 Chr04 43074408 6e-34
CaES1344 Chr04 43113400 3e-35
CaES1235 Chr04 43648200 1e-118
CaES1870 Chr04 44010389 1e-116
CaES5057 Chr04 44132333 1e-105
CaES1409 Chr04 44524933 1e-70
CaES3810 Chr04 48650695 5e-48
CaES5498 Chr04 49115188 2e-26
CaES0841 Chr04 51840724 9e-78
CaES2387 Chr04 52163005 6e-50
CaES2956 Chr04 52780558 6e-83
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 360

MarkerDB | Capsicum annuum