Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr03

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 651


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0011 Chr03 246870485 6e-57
CaES0012 Chr03 36189006 3e-97
CaES0023 Chr03 189776849 9e-51
CaES0024 Chr03 134278048 1e-123
CaES0028 Chr03 225689992 2e-61
CaES0039 Chr03 98428644 2e-98
CaES0051 Chr03 134277737 3e-50
CaES0052 Chr03 14908867 8e-32
CaES0059 Chr03 230657327 3e-50
CaES0064 Chr03 5509000 1e-94
CaES0066 Chr03 34892681 1e-103
CaES0072 Chr03 238412268 3e-92
CaES0075 Chr03 34788790 1e-114
CaES0079 Chr03 3957728 1e-115
CaES0081 Chr03 95195855 1e-154
CaES0085 Chr03 18413804 2e-62
CaES0096 Chr03 54808413 5e-65
CaES0104 Chr03 40656417 2e-79
CaES0114 Chr03 45693585 6e-87
CaES0125 Chr03 4303227 1e-109
CaES0130 Chr03 16740495 1e-102
CaES0132 Chr03 12636518 4e-36
CaES0156 Chr03 894281 1e-125
CaES0158 Chr03 784430 1e-131
CaES0163 Chr03 96968363 1e-147
CaES0164 Chr03 28276533 1e-121
CaES0173 Chr03 212594050 1e-106
CaES0189 Chr03 11693572 3e-79
CaES0191 Chr03 233706699 1e-147
CaES0204 Chr03 10920946 1e-97
CaES0212 Chr03 79024479 1e-117
CaES0213 Chr03 33373797 1e-103
CaES0215 Chr03 248149625 4e-78
CaES0217 Chr03 36141688 1e-107
CaES0225 Chr03 4720109 1e-108
CaES0227 Chr03 12721906 1e-120
CaES0232 Chr03 6752786 1e-123
CaES0255 Chr03 232351640 5e-66
CaES0284 Chr03 8547333 1e-117
CaES0306 Chr03 47147845 8e-83
CaES0318 Chr03 22683536 5e-51
CaES0339 Chr03 6062392 1e-111
CaES0343 Chr03 783926 2e-78
CaES0350 Chr03 35665448 2e-63
CaES0363 Chr03 43428548 4e-94
CaES0369 Chr03 229469175 5e-97
CaES0370 Chr03 234664295 1e-136
CaES0371 Chr03 5547898 4e-96
CaES0376 Chr03 36552288 1e-46
CaES0384 Chr03 223813383 5e-80
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 651

MarkerDB | Capsicum annuum