Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr02

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 525


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES2523 0.0 0 Chr02 95419918 5e-59
CaES1169 0.0 0 Chr02 99850037 2e-78
CaES3264 0.0 0 Chr02 129741419 9e-99
CaES5024 0.0 180 Chr02 133954901 1e-150
CaES1137 0.236 190 Chr02 56999566 9e-88
CaES1208 0.0 191 Chr02 22362537 1e-125
CaES2920 0.081 191 Chr02 160234148 1e-118
CaES1415 0.0 192 Chr02 18284094 1e-128
CaES2489 0.005 192 Chr02 148792071 2e-59
CaES1356 Chr02 451767 1e-122
CaES0878 Chr02 1277048 1e-115
CaES4462 Chr02 2692994 1e-95
CaES4868 Chr02 4088293 1e-121
CaES0581 Chr02 5800918 1e-124
CaES5418 Chr02 8359479 9e-64
CaES3849 Chr02 8359479 1e-140
CaES3255 Chr02 10141988 1e-103
CaES4587 Chr02 10469942 8e-68
CaES3788 Chr02 11644338 1e-143
CaES0179 Chr02 13502962 1e-117
CaES1753 Chr02 14876372 4e-70
CaES5352 Chr02 15809563 1e-105
CaES3385 Chr02 18193485 1e-101
CaES5667 Chr02 19109222 4e-68
CaES1553 Chr02 19111324 1e-25
CaES0062 Chr02 19756431 1e-116
CaES5581 Chr02 21464635 1e-91
CaES1973 Chr02 22652323 1e-149
CaES0528 Chr02 24594742 2e-70
CaES1332 Chr02 24594775 1e-94
CaES4091 Chr02 24825566 1e-127
CaES4352 Chr02 25140064 1e-135
CaES3974 Chr02 26418400 1e-115
CaES5624 Chr02 27077005 1e-108
CaES3120 Chr02 27079242 1e-146
CaES2421 Chr02 28136355 3e-80
CaES3897 Chr02 30116410 3e-62
CaES2502 Chr02 31346297 3e-40
CaES1867 Chr02 33438661 1e-116
CaES0317 Chr02 37395825 1e-145
CaES2585 Chr02 37885017 2e-59
CaES2390 Chr02 39686317 2e-53
CaES4794 Chr02 42866303 1e-125
CaES1824 Chr02 43142059 3e-81
CaES1252 Chr02 43155370 1e-61
CaES3303 Chr02 48848321 2e-58
CaES3034 Chr02 52447608 1e-99
CaES3714 Chr02 52851407 1e-111
CaES5709 Chr02 54209251 1e-120
CaES1885 Chr02 54560234 4e-64
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 525


MarkerDB | Capsicum annuum