Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr01

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 575

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
Name Position*
CaES3408 Chr01 295024463 1e-124
CaES4771 Chr01 295046165 1e-141
CaES0553 Chr01 296396244 1e-118
CaES0532 Chr01 297385267 7e-33
CaES4995 Chr01 297564481 1e-57
CaES2935 Chr01 297570489 8e-83
CaES5608 Chr01 297874411 1e-70
CaES1115 Chr01 297910051 1e-137
CaES2845 Chr01 297912943 1e-135
CaES3376 Chr01 297936914 1e-62
CaES2166 Chr01 298753695 1e-120
CaES5745 Chr01 298785335 3e-75
CaES4938 Chr01 299155047 3e-96
CaES2163 Chr01 299227504 7e-61
CaES5349 Chr01 299529699 3e-40
CaES1830 Chr01 299871248 1e-161
CaES3887 Chr01 299916822 1e-140
CaES0718 Chr01 299927913 2e-93
CaES1228 Chr01 300242277 2e-26
CaES3262 Chr01 300307430 1e-114
CaES5707 Chr01 300759263 1e-131
CaES3906 Chr01 300759335 1e-116
CaES1162 Chr01 300770048 1e-140
CaES4229 Chr01 300770879 1e-108
CaES2717 Chr01 300811962 5e-90
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 575

MarkerDB | Capsicum annuum