Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3871 Chr00 544834360 1e-72
CaES1383 Chr00 544941793 8e-82
CaES1251 Chr00 544950962 6e-84
CaES3564 Chr00 544971521 1e-148
CaES0368 Chr00 545023527 1e-127
CaES1681 Chr00 545173643 1e-59
CaES1468 Chr00 545210902 5e-34
CaES2160 Chr00 545624522 5e-94
CaES5285 Chr00 545698398 1e-106
CaES5281 Chr00 545793967 1e-117
CaES4559 Chr00 550097166 1e-125
CaES1557 Chr00 551290606 4e-38
CaES5601 Chr00 553038236 2e-45
CaES2905 Chr00 558076605 1e-36
CaES2366 Chr00 558388652 1e-119
CaES3834 Chr00 558430452 6e-83
CaES2885 Chr00 558458790 1e-149
CaES4100 Chr00 560304656 2e-60
CaES4024 Chr00 560904891 2e-95
CaES4345 Chr00 560904891 5e-93
CaES0388 Chr00 561465183 1e-139
CaES4046 Chr00 563204839 1e-139
CaES3363 Chr00 563205474 1e-147
CaES2924 Chr00 563825658 1e-143
CaES5215 Chr00 566975713 1e-97
CaES5642 0.0 192 Chr00 572299887 1e-70
CaES0989 Chr00 572785773 1e-99
CaES0124 Chr00 572785990 1e-108
CaES0863 0.0 190 Chr00 572796829 1e-137
CaES4623 Chr00 574293376 2e-68
CaES3509 Chr00 574602099 8e-43
CaES3899 Chr00 574635965 1e-124
CaES4975 Chr00 574673708 1e-129
CaES5204 Chr00 574736244 4e-45
CaES0068 Chr00 575012881 1e-128
CaES4093 Chr00 575051318 1e-131
CaES1845 Chr00 575484232 1e-105
CaES2088 Chr00 577165455 1e-118
CaES3156 Chr00 579577396 1e-146
CaES1149 Chr00 579588122 7e-76
CaES0645 Chr00 579645150 1e-136
CaES1752 Chr00 580110176 1e-131
CaES1396 Chr00 580128613 1e-121
CaES4203 Chr00 580193923 1e-115
CaES4076 Chr00 580304266 2e-98
CaES1510 Chr00 580313121 2e-73
CaES0365 Chr00 580340495 1e-63
CaES2957 Chr00 580478616 5e-80
CaES0819 Chr00 581081328 1e-110
CaES3427 Chr00 581935007 1e-148
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum