Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES3748 Chr00 482982443 1e-114
CaES3252 Chr00 483008927 7e-97
CaES1837 Chr00 485995557 1e-136
CaES3360 Chr00 487235209 4e-98
CaES3945 Chr00 487286837 3e-78
CaES0065 Chr00 487364598 5e-82
CaES4530 Chr00 487502515 7e-69
CaES5748 Chr00 490087580 8e-95
CaES4455 Chr00 490548641 1e-148
CaES2582 Chr00 490552018 1e-138
CaES2792 Chr00 490585901 1e-144
CaES1806 Chr00 491917314 1e-145
CaES2816 Chr00 491917553 1e-107
CaES5088 Chr00 493495127 2e-99
CaES0686 Chr00 494419978 5e-93
CaES0009 Chr00 494784781 2e-96
CaES2191 Chr00 494860488 1e-125
CaES0412 Chr00 495011414 1e-139
CaES4779 Chr00 495982656 1e-124
CaES0691 Chr00 497127986 5e-97
CaES2326 Chr00 497433350 1e-110
CaES1522 Chr00 498594947 3e-87
CaES5742 Chr00 499629869 2e-89
CaES5231 Chr00 499763546 2e-53
CaES4581 Chr00 501587552 1e-155
CaES4167 Chr00 501588347 1e-117
CaES4459 Chr00 501606017 4e-50
CaES3588 Chr00 501906410 5e-71
CaES3394 Chr00 502118922 1e-103
CaES2197 Chr00 502176292 1e-119
CaES2877 Chr00 502182560 1e-100
CaES0451 Chr00 503225364 3e-62
CaES4335 Chr00 503291794 3e-61
CaES1125 Chr00 503303274 8e-88
CaES4132 Chr00 503379089 1e-144
CaES5055 Chr00 503417164 1e-114
CaES3704 Chr00 503506249 1e-118
CaES3029 Chr00 503507839 1e-141
CaES0601 Chr00 503536428 1e-138
CaES0616 Chr00 504622909 6e-79
CaES1716 Chr00 505872476 1e-121
CaES2228 Chr00 507835395 6e-86
CaES5476 Chr00 507880566 4e-61
CaES3970 Chr00 508416455 1e-129
CaES2171 Chr00 508889150 1e-113
CaES2074 Chr00 509593899 1e-136
CaES2773 Chr00 509879054 1e-103
CaES4835 Chr00 509956988 1e-139
CaES0776 Chr00 510585380 1e-83
CaES1132 Chr00 513033594 1e-89
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604


MarkerDB | Capsicum annuum