Pepper Marker Database

Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet) list : Pepper.v.1.5.chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet)

Total Entries: 256


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Pepper.v.1.5)
Evalue
Name Position*
CaES5674 Pepper.v.1.5.chr09 101068278 1e-100
CaES5129 Pepper.v.1.5.chr09 102610039 2e-39
CaES5539 Pepper.v.1.5.chr09 102610039 1e-38
CaES0035 Pepper.v.1.5.chr09 102815170 7e-39
CaES3798 Pepper.v.1.5.chr09 103241992 1e-154
CaES2494 Pepper.v.1.5.chr09 103942364 2e-23
CaES4734 Pepper.v.1.5.chr09 117629884 1e-119
CaES2328 Pepper.v.1.5.chr09 118442308 1e-147
CaES0336 Pepper.v.1.5.chr09 118978587 1e-110
CaES0962 Pepper.v.1.5.chr09 121646985 1e-115
CaES2589 Pepper.v.1.5.chr09 121797984 3e-88
CaES4724 Pepper.v.1.5.chr09 123186427 1e-147
CaES1851 Pepper.v.1.5.chr09 123317355 1e-115
CaES0283 Pepper.v.1.5.chr09 127331335 1e-98
CaES2463 Pepper.v.1.5.chr09 133516013 1e-33
CaES4182 Pepper.v.1.5.chr09 133516827 8e-92
CaES3591 Pepper.v.1.5.chr09 133516827 1e-101
CaES1317 Pepper.v.1.5.chr09 134488644 3e-37
CaES2930 0.234 192 Pepper.v.1.5.chr09 136148088 1e-143
CaES4574 Pepper.v.1.5.chr09 143394405 1e-136
CaES0778 Pepper.v.1.5.chr09 147331930 1e-105
CaES4380 Pepper.v.1.5.chr09 147696578 1e-104
CaES5460 Pepper.v.1.5.chr09 151674876 6e-53
CaES0338 Pepper.v.1.5.chr09 153925666 1e-124
CaES3656 Pepper.v.1.5.chr09 154448264 1e-139
CaES3581 Pepper.v.1.5.chr09 154872399 1e-103
CaES1043 Pepper.v.1.5.chr09 154874040 1e-164
CaES0130 Pepper.v.1.5.chr09 160752132 4e-28
CaES2090 Pepper.v.1.5.chr09 165829142 2e-47
CaES2917 Pepper.v.1.5.chr09 172232171 1e-145
CaES1066 Pepper.v.1.5.chr09 173381799 1e-72
CaES2581 Pepper.v.1.5.chr09 173619496 1e-138
CaES0315 Pepper.v.1.5.chr09 175604714 1e-41
CaES0044 Pepper.v.1.5.chr09 176180063 1e-104
CaES3450 Pepper.v.1.5.chr09 177766407 1e-140
CaES3583 0.0 0 Pepper.v.1.5.chr09 180480382 1e-115
CaES0373 Pepper.v.1.5.chr09 185095062 3e-97
CaES3949 Pepper.v.1.5.chr09 185561190 1e-110
CaES3673 Pepper.v.1.5.chr09 187741093 4e-99
CaES0862 Pepper.v.1.5.chr09 188969156 3e-72
CaES4219 Pepper.v.1.5.chr09 190702316 1e-60
CaES1474 Pepper.v.1.5.chr09 191484689 1e-79
CaES3748 Pepper.v.1.5.chr09 192403868 1e-120
CaES3252 Pepper.v.1.5.chr09 192428052 1e-96
CaES4349 Pepper.v.1.5.chr09 194320859 1e-87
CaES0863 0.0 190 Pepper.v.1.5.chr09 195645385 1e-137
CaES0124 Pepper.v.1.5.chr09 195656384 1e-108
CaES0989 Pepper.v.1.5.chr09 195656601 1e-99
CaES5642 0.0 192 Pepper.v.1.5.chr09 196141364 7e-73
CaES3720 Pepper.v.1.5.chr09 199434883 2e-53
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 256


MarkerDB | Capsicum annuum