Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS3540 chr5 16738965 2e-60 LG1 0.0
RSS0553 chr5 14632854 1e-74 LG1 54.4
RSS1752 chr5 6852037 1e-58 LG1 73.0
RSS1395 chr5 24362967 2e-47 LG1 75.5
RSS1194 chr5 4995793 6e-49 LG1 99.0
RSS0403 chr5 5499705 1e-108 LG1 103.2
RSS2744 chr5 5576671 1e-101 LG1 103.6
RSS0011 chr5 19012817 2e-35 LG1 103.6
RSS2945 chr5 6015919 2e-87 LG1 104.7
RSS1012 chr5 6230357 1e-81 LG1 104.8
RSS2692 chr5 6492699 5e-66 LG1 107.0
RSS1758 chr5 6582021 3e-78 LG1 107.4
RSS2706 chr5 6538012 3e-28 LG1 107.5
RSS1273 chr5 6561378 3e-96 LG1 107.7
RSS3991 chr5 1173604 8e-26 LG1 108.0
RSS1786 chr5 55278 5e-22 LG1 109.2
RSS3973 chr5 543006 1e-45 LG1 109.3
RSS1147 chr5 628527 2e-35 LG1 109.3
RSS1574 chr5 711636 3e-45 LG1 109.3
RSS2914_a chr5 807713 5e-61 LG1 109.7
RSS0239 chr5 1092653 1e-34 LG1 110.0
RSS1523 chr5 3890321 1e-75 LG1 120.8
RSS2724 chr5 26451595 5e-48 LG2 34.1
RSS0727 chr5 24951796 4e-68 LG2 39.8
RSS2078 chr5 24835252 3e-65 LG2 40.8
RSS0254 chr5 7954948 2e-76 LG2 42.2
RSS3534 chr5 19341483 1e-116 LG2 56.4
RSS0660 chr5 25116299 2e-24 LG2 96.9
RSS3043 chr5 13584825 2e-76 LG3 73.7
RSS1774 chr5 24022838 3e-24 LG3 110.8
RSS0380 chr5 13912307 8e-55 LG3 111.9
RSS3635 chr5 25893396 4e-57 LG3 114.1
RSS0640 chr5 25423448 6e-40 LG3 122.8
RSS0020 chr5 25915840 1e-55 LG3 123.8
RSS1445 chr5 25763466 5e-37 LG3 124.3
RSS2179 chr5 25730987 7e-57 LG3 124.5
RSS1421 chr5 25665168 6e-45 LG3 124.9
RSS2428 chr5 25611632 1e-45 LG3 125.2
RSS1293 chr5 25615539 2e-66 LG3 125.2
RSS0255 chr5 25216934 5e-29 LG3 126.4
RSS1155 chr5 24926452 1e-35 LG3 127.4
RSS2459 chr5 25076914 1e-42 LG3 127.6
RSS2078_a chr5 24835252 3e-65 LG3 128.2
RSS3500 chr5 1622059 2e-67 LG4 30.6
RSS3739 chr5 16788930 4e-80 LG4 66.3
RSS1061 chr5 14913201 5e-99 LG4 76.0
RSS3516 chr5 17452765 9e-75 LG4 77.1
RSS0369 chr5 18406534 1e-87 LG4 79.8
RSS3616 chr5 17557648 7e-37 LG4 85.6
RSS3637 chr5 19788906 9e-70 LG4 87.9
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus