Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS2945 chr5 6015919 2e-87 LG1 104.7
RSS3573 chr5 6090603 4e-69
RSS0961 chr5 6109331 3e-32
RSS0433 chr5 6135588 3e-68
RSS1784 chr5 6177966 2e-96
RSS2904 chr5 6218657 1e-57
RSS2987 chr5 6218657 1e-33
RSS1090 chr5 6221909 2e-85
RSS1012 chr5 6230357 1e-81 LG1 104.8
RSS1622 chr5 6267319 6e-58
RSS1299 chr5 6415491 2e-78
RSS2692 chr5 6492699 5e-66 LG1 107.0
RSS2706 chr5 6538012 3e-28 LG1 107.5
RSS2634 chr5 6555374 1e-72 LG8 68.0
RSS1904 chr5 6559463 3e-78
RSS1273 chr5 6561378 3e-96 LG1 107.7
RSS1758 chr5 6582021 3e-78 LG1 107.4
RSS1758_a chr5 6582021 3e-78 LG5 64.6
RSS1743 chr5 6582465 4e-77 LG8 67.3
RSS1514 chr5 6688612 1e-121
RSS3238 chr5 6718391 7e-73
RSS1931 chr5 6729339 1e-36 LG8 66.9
RSS0374 chr5 6757681 7e-80
RSS3002 chr5 6779890 6e-73 LG8 67.0
RSS2540 chr5 6779995 4e-79
RSS2308 chr5 6815067 3e-29 LG5 55.6
RSS0014 chr5 6852025 9e-67
RSS1752 chr5 6852037 1e-58 LG1 73.0
RSS3172 chr5 6852409 7e-83 LG8 67.0
RSS2293 chr5 6967913 1e-115
RSS0945 chr5 6990285 1e-105
RSS2359 chr5 6999898 1e-24 LG8 67.0
RSS0245 chr5 7006673 1e-107
RSS1441 chr5 7006952 2e-39
RSS2131 chr5 7068237 2e-25
RSS3795 chr5 7084555 5e-80
RSS2928 chr5 7091596 1e-39
RSS0970 chr5 7107893 6e-57
RSS1800 chr5 7110480 2e-71
RSS2524 chr5 7156831 1e-101
RSS3424 chr5 7166053 3e-36
RSS3493 chr5 7249874 1e-50
RSS2180 chr5 7249922 2e-61
RSS2351 chr5 7249922 2e-24
RSS2068 chr5 7249943 1e-50
RSS0624 chr5 7265451 1e-78
RSS0692 chr5 7277669 9e-58 LG8 66.3
RSS1117 chr5 7277669 9e-56 LG8 66.3
RSS0172 chr5 7278601 2e-85
RSS2876 chr5 7278601 2e-69
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730


MarkerDB | Raphanus sativus