Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS3560 chr5 3235776 1e-111
RSS0023 chr5 3267894 5e-25
RSS1374 chr5 3270891 3e-83 LG5 134.4
RSS3763 chr5 3334436 5e-37
RSS3798 chr5 3359015 2e-55
RSS2589 chr5 3410827 3e-58
RSS3720 chr5 3429319 2e-76
RSS1858 chr5 3464860 1e-111
RSS2169 chr5 3465136 7e-47
RSS0529 chr5 3479852 1e-107
RSS0525 chr5 3480293 1e-107
RSS0756 chr5 3498636 1e-132
RSS1443 chr5 3516769 2e-38
RSS2743 chr5 3525195 9e-47
RSS2951 chr5 3525246 3e-70
RSS3357 chr5 3556064 8e-75
RSS1265 chr5 3598045 2e-95
RSS0486 chr5 3685550 2e-60 LG8 74.5
RSS2764 chr5 3757718 1e-77 LG8 74.3
RSS2670 chr5 3763107 2e-54
RSS2452 chr5 3774058 1e-61
RSS4037 chr5 3792785 1e-104
RSS0055 chr5 3823194 1e-62
RSS1185 chr5 3831824 1e-102
RSS0676 chr5 3860765 5e-69
RSS1083 chr5 3860765 6e-64
RSS1523 chr5 3890321 1e-75 LG1 120.8
RSS0370 chr5 3890585 2e-51
RSS2067 chr5 3955136 2e-55
RSS2437 chr5 4037008 1e-75
RSS1252 chr5 4047098 3e-53 LG9 11.3
RSS1717 chr5 4047113 1e-64
RSS0713 chr5 4058745 9e-73
RSS3523 chr5 4068950 7e-40
RSS1010 chr5 4073335 1e-78
RSS3606 chr5 4150107 3e-57
RSS1733 chr5 4156795 1e-84
RSS3724 chr5 4196917 1e-124
RSS2028 chr5 4249753 2e-40
RSS1866 chr5 4253644 1e-86
RSS0110 chr5 4303405 3e-94
RSS1997 chr5 4308853 2e-93
RSS3429 chr5 4308868 2e-97
RSS3396 chr5 4308886 1e-101
RSS2762 chr5 4361716 4e-50
RSS2373 chr5 4369243 3e-36
RSS1384 chr5 4391773 1e-108
RSS2870 chr5 4448609 8e-96
RSS2403 chr5 4452555 2e-54 LG8 72.5
RSS0167 chr5 4453633 7e-70
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730


MarkerDB | Raphanus sativus