Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS2937 chr5 1521049 8e-42
RSS0150 chr5 1537113 7e-35
RSS2877 chr5 1542988 1e-68
RSS2054 chr5 1549124 2e-80
RSS2514 chr5 1551780 2e-40
RSS1999 chr5 1588581 1e-58
RSS0164 chr5 1609344 1e-108
RSS3500 chr5 1622059 2e-67 LG4 30.6
RSS3171 chr5 1640037 1e-44
RSS0411 chr5 1664562 2e-86
RSS3410 chr5 1672419 1e-100
RSS1072 chr5 1682607 1e-99
RSS0622 chr5 1696618 5e-50
RSS1464 chr5 1706519 1e-118
RSS3955 chr5 1931672 1e-100
RSS3524 chr5 1973822 1e-115
RSS3652 chr5 2002870 2e-84
RSS2646 chr5 2069311 5e-50
RSS3691 chr5 2147556 1e-80
RSS0224 chr5 2175937 1e-107
RSS3743 chr5 2183977 6e-70
RSS2921 chr5 2200767 4e-86
RSS3636 chr5 2273692 3e-82
RSS3580 chr5 2273692 1e-103
RSS0932 chr5 2300967 1e-41
RSS1310 chr5 2363014 4e-68
RSS2237 chr5 2384342 1e-30
RSS3783 chr5 2632007 1e-64
RSS1312 chr5 2666628 1e-83
RSS0317 chr5 2668048 1e-101
RSS1576 chr5 2680822 6e-95
RSS2972 chr5 2719724 2e-62
RSS3334 chr5 2761305 9e-52
RSS2627 chr5 2764112 2e-52
RSS2307 chr5 2764679 1e-57
RSS2584 chr5 2853330 1e-102
RSS1920 chr5 2853651 1e-74
RSS2171 chr5 2856402 6e-44
RSS4033 chr5 2859902 1e-109
RSS1257 chr5 2877566 5e-51
RSS2477 chr5 2888423 3e-65
RSS1428 chr5 2895073 6e-75
RSS1613 chr5 2984224 1e-26
RSS1197 chr5 2994289 3e-79
RSS2059 chr5 3047375 2e-39
RSS0611 chr5 3053922 7e-34
RSS0036 chr5 3065221 4e-73
RSS0461 chr5 3083331 1e-80
RSS1599 chr5 3100022 4e-55
RSS3744 chr5 3125742 2e-34
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus