Radish Marker Database

Arabidopsis genome (TAIR10) list : chr3

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 721


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS2296 chr3 1340095 4e-75 LG3 4.3
RSS0189 chr3 1363518 5e-65
RSS3770 chr3 1364253 2e-40
RSS2635 chr3 1367419 2e-41
RSS0361 chr3 1422443 2e-41 LG3 4.0
RSS3244 chr3 1425011 1e-100 LG3 147.1
RSS3401 chr3 1425050 9e-99
RSS3128 chr3 1480627 2e-57
RSS3190 chr3 1490905 9e-55
RSS1459 chr3 1614638 5e-69
RSS3245 chr3 1656900 8e-45 LG3 147.1
RSS0463 chr3 1766464 4e-77
RSS3850 chr3 1787490 5e-56
RSS2055 chr3 1823696 8e-86
RSS1454 chr3 1824784 3e-77
RSS1339 chr3 1830154 4e-98
RSS1479 chr3 1908899 7e-72
RSS2845 chr3 1936441 3e-66
RSS3694 chr3 1939126 6e-96 LG3 9.5
RSS2475 chr3 1948810 4e-31
RSS0934 chr3 1992316 3e-73
RSS3978 chr3 2015097 2e-70
RSS2596 chr3 2054879 2e-46
RSS1361 chr3 2133154 4e-65 LG3 8.5
RSS1661 chr3 2145716 1e-103 LG3 147.1
RSS0401 chr3 2152326 2e-77
RSS1791 chr3 2168041 2e-53
RSS1739 chr3 2168175 7e-63
RSS3332 chr3 2188233 2e-53
RSS0683 chr3 2315523 9e-70
RSS1521 chr3 2327016 2e-73
RSS0094 chr3 2329629 5e-98
RSS3941 chr3 2336699 1e-123
RSS2053 chr3 2347908 1e-85
RSS1919 chr3 2354869 1e-76
RSS2620 chr3 2365824 8e-64
RSS2231 chr3 2389110 2e-39
RSS3759 chr3 2407320 3e-58
RSS0718 chr3 2411692 2e-26
RSS1071 chr3 2446145 1e-86
RSS2467 chr3 2486742 9e-28
RSS2745 chr3 2488427 1e-117
RSS1097 chr3 2511439 2e-91
RSS1360 chr3 2514934 2e-40
RSS2427 chr3 2518519 2e-74
RSS0213 chr3 2581586 2e-54
RSS1768 chr3 2612796 6e-81
RSS1242 chr3 2621138 2e-82 LG3 13.3
RSS1489 chr3 2641924 1e-76 LG3 13.3
RSS0113 chr3 2659954 1e-72
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 721


MarkerDB | Raphanus sativus