Radish Marker Database

Arabidopsis genome (TAIR10) list : chr2

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 499


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS1179 chr2 3411131 1e-129
RSS1618 chr2 4311465 1e-60
RSS3376 chr2 4803191 1e-109
RSS3593 chr2 5168787 1e-110
RSS1004 chr2 5512055 1e-103
RSS2046 chr2 5706826 4e-21
RSS3873 chr2 5915140 3e-72
RSS3092 chr2 6043074 5e-75
RSS1063 chr2 6408787 7e-63 LG6 82.3
RSS2925 chr2 6617317 2e-61
RSS1685 chr2 6744631 9e-96
RSS0116 chr2 6775503 2e-66
RSS2716 chr2 6834709 8e-93
RSS0668 chr2 6905873 5e-68
RSS3392 chr2 6947356 1e-31
RSS1007 chr2 6974897 1e-70
RSS3188 chr2 6984716 3e-49
RSS1173 chr2 7098076 4e-29
RSS3444 chr2 7160430 2e-61
RSS1731 chr2 7200874 1e-106
RSS2949_a chr2 7268594 3e-65 LG2 73.5
RSS0757 chr2 7345082 1e-55
RSS3251 chr2 7360554 5e-36
RSS2665 chr2 7459255 3e-90 LG3 115.7
RSS0392 chr2 7459255 2e-93
RSS0079 chr2 7489376 5e-99
RSS3214 chr2 7498808 2e-40
RSS0399 chr2 7508636 1e-130
RSS2759 chr2 7508675 1e-119
RSS0458 chr2 7517083 2e-88
RSS0125 chr2 7517167 3e-91 LG3 116.1
RSS0965 chr2 7556673 7e-67
RSS0200 chr2 7564459 3e-85
RSS1998 chr2 7564501 1e-137 LG9 9.9
RSS2411 chr2 7577203 1e-93
RSS3966 chr2 7631276 2e-32
RSS1336 chr2 7716075 2e-66 LG3 116.3
RSS3159 chr2 7716090 3e-22
RSS0575 chr2 7757633 1e-83 LG3 116.2
RSS0173 chr2 7757633 2e-70 LG3 116.3
RSS2559 chr2 7765181 3e-69 LG4 136.0
RSS0847 chr2 7767469 7e-45
RSS3131 chr2 7827873 5e-62
RSS2546 chr2 7837822 3e-97
RSS0082 chr2 7842286 2e-70
RSS4018 chr2 7898466 3e-72
RSS1496 chr2 7898794 2e-72
RSS3009 chr2 7909383 1e-115
RSS2551 chr2 7918136 5e-93
RSS3375 chr2 7930280 1e-68
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 499


MarkerDB | Raphanus sativus