Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS0466 chr1 30192194 1e-100 LG1 31.2
RSS0449 chr1 30218042 6e-29 LG1 31.3
RSS3262 chr1 30083151 1e-27 LG1 31.4
RSS3922 chr1 30084822 2e-84 LG1 31.4
RSS0291 chr1 24610208 3e-31 LG1 56.2
RSS0893 chr1 28882831 1e-91 LG1 63.4
RSS0043 chr1 28882711 8e-26 LG1 63.6
RSS1241 chr1 28728423 7e-50 LG1 63.8
RSS1896 chr1 28697943 6e-60 LG1 64.2
RSS1737 chr1 28587141 4e-38 LG1 64.6
RSS3091 chr1 28562009 2e-46 LG1 65.4
RSS3615 chr1 28367215 2e-39 LG1 66.1
RSS1781 chr1 28158051 4e-82 LG1 66.9
RSS0675 chr1 28535105 1e-95 LG1 70.6
RSS0577 chr1 28298397 1e-41 LG1 71.7
RSS3362 chr1 27982791 2e-52 LG1 83.9
RSS0662 chr1 21030242 1e-100 LG2 10.9
RSS0518 chr1 22800993 1e-103 LG2 27.9
RSS0124 chr1 21517203 3e-45 LG2 30.8
RSS2701 chr1 21983688 2e-68 LG2 31.0
RSS3844 chr1 20863833 2e-77 LG2 50.3
RSS1178 chr1 6244949 5e-47 LG2 70.4
RSS0489 chr1 6369539 1e-102 LG2 71.6
RSS0406 chr1 5488374 2e-30 LG2 78.0
RSS0171 chr1 13669782 1e-102 LG2 135.4
RSS2290 chr1 11663590 1e-78 LG3 58.8
RSS1973 chr1 307042 7e-49 LG3 64.1
RSS2992 chr1 574722 1e-40 LG3 65.2
RSS3723 chr1 1168658 1e-116 LG3 67.0
RSS2090 chr1 2012586 1e-93 LG3 69.2
RSS0810 chr1 5209031 8e-70 LG3 70.8
RSS2831 chr1 3594310 8e-78 LG3 73.4
RSS2679 chr1 3502515 3e-66 LG3 73.6
RSS3666 chr1 4187772 2e-53 LG3 95.8
RSS3072 chr1 18359196 1e-61 LG3 101.7
RSS0430_a chr1 18738576 1e-113 LG3 104.1
RSS0609 chr1 19643843 3e-79 LG3 107.6
RSS3177 chr1 19645919 3e-73 LG3 108.5
RSS0192 chr1 4017588 2e-72 LG3 110.4
RSS2263 chr1 19119297 1e-41 LG3 140.7
RSS0662_b chr1 21030242 1e-100 LG3 142.4
RSS0662_a chr1 21030242 1e-100 LG3 143.9
RSS2818 chr1 4632681 1e-114 LG4 8.1
RSS2245 chr1 2077313 1e-46 LG4 41.9
RSS1710 chr1 23795180 5e-46 LG4 57.6
RSS2079 chr1 24596790 2e-30 LG4 64.2
RSS0822 chr1 27626182 3e-61 LG5 0.0
RSS0477 chr1 28149508 8e-34 LG5 4.2
RSS1262 chr1 26085985 1e-60 LG5 13.2
RSS3268 chr1 26041341 3e-94 LG5 15.4
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788


MarkerDB | Raphanus sativus