Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS3256 chr1 11972539 1e-28
RSS0923 chr1 12046844 1e-80 LG9 16.4
RSS1725 chr1 12052756 1e-107
RSS3597 chr1 12053665 6e-70
RSS2501 chr1 12054031 8e-67
RSS1553 chr1 12069641 8e-81
RSS2063 chr1 12207851 1e-86
RSS0025 chr1 12360868 4e-47
RSS2469 chr1 12551182 1e-25
RSS2552 chr1 12590084 8e-82 LG9 15.4
RSS2375 chr1 12671457 5e-53
RSS3466 chr1 12685887 2e-72
RSS3731 chr1 12744362 5e-66
RSS3902 chr1 13122759 9e-96
RSS3789 chr1 13226415 1e-104
RSS2691 chr1 13226469 1e-102
RSS0772 chr1 13364926 1e-92
RSS0171 chr1 13669782 1e-102 LG2 135.4
RSS3231 chr1 13698261 4e-74
RSS2924 chr1 14029073 3e-97
RSS1951 chr1 16267465 1e-117
RSS0821 chr1 16468199 2e-74
RSS2797 chr1 16622513 3e-76
RSS0997 chr1 16849891 1e-103 LG9 17.0
RSS2879 chr1 16908867 2e-90
RSS2117 chr1 16941309 3e-47
RSS0405 chr1 17075533 2e-38
RSS0854 chr1 17192616 5e-72
RSS3550 chr1 17192616 5e-39
RSS1391 chr1 17319217 1e-127
RSS3958 chr1 17321430 2e-31
RSS0344 chr1 17328202 1e-115
RSS0281 chr1 17351152 3e-87
RSS0888 chr1 17433294 8e-61
RSS3926 chr1 17487284 1e-108
RSS2941 chr1 17487503 4e-90
RSS1769 chr1 17647525 2e-44 LG7 82.4
RSS3048 chr1 17661446 1e-34
RSS3318 chr1 17682727 1e-79
RSS1003 chr1 17879164 4e-96
RSS0387 chr1 17898553 1e-103
RSS2396 chr1 17909426 2e-95
RSS2837 chr1 17948254 2e-37
RSS3974 chr1 17957065 3e-91
RSS3546 chr1 17967072 8e-57
RSS2328 chr1 17975976 6e-33
RSS3882 chr1 18045419 2e-46
RSS3100 chr1 18139900 2e-62
RSS1407 chr1 18236225 1e-85
RSS1491 chr1 18314944 7e-42
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788


MarkerDB | Raphanus sativus