Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS0279 chr1 1149999 3e-72
RSS0281 chr1 17351152 3e-87
RSS0290 chr1 5296569 7e-46
RSS0291 chr1 24610208 3e-31 LG1 56.2
RSS0296 chr1 20928566 4e-63
RSS0300 chr1 5212023 6e-91
RSS0302 chr1 3016017 2e-83
RSS0312 chr1 20675168 2e-83
RSS0321 chr1 25532735 3e-96
RSS0325 chr1 8982946 3e-90 LG9 32.5
RSS0326 chr1 3938964 1e-118
RSS0327 chr1 5924304 7e-33 LG7 21.0
RSS0332 chr1 28459024 1e-114
RSS0335 chr1 28528422 1e-64
RSS0337 chr1 3175141 2e-57
RSS0344 chr1 17328202 1e-115
RSS0357 chr1 23151906 6e-86
RSS0358 chr1 3443726 5e-43
RSS0362 chr1 9636687 5e-91
RSS0366 chr1 5867882 2e-78
RSS0382 chr1 10175363 3e-38 LG7 34.9
RSS0387 chr1 17898553 1e-103
RSS0390 chr1 3849793 6e-50
RSS0394 chr1 1836918 3e-60
RSS0405 chr1 17075533 2e-38
RSS0406 chr1 5488374 2e-30 LG2 78.0
RSS0410 chr1 25127838 5e-36
RSS0416 chr1 11673556 8e-70
RSS0417 chr1 2292027 4e-71
RSS0419 chr1 18738825 4e-82
RSS0424 chr1 10945612 1e-80
RSS0427 chr1 11398807 1e-59
RSS0430 chr1 18738576 1e-113 LG9 9.7
RSS0430_a chr1 18738576 1e-113 LG3 104.1
RSS0434 chr1 6688862 3e-62
RSS0437 chr1 6396563 2e-81
RSS0438 chr1 3430422 4e-75
RSS0442 chr1 10625481 1e-68 LG9 24.2
RSS0444 chr1 2054228 8e-57
RSS0449 chr1 30218042 6e-29 LG1 31.3
RSS0452 chr1 23392573 4e-78
RSS0462 chr1 1746203 3e-54
RSS0466 chr1 30192194 1e-100 LG1 31.2
RSS0475 chr1 27594103 5e-90 LG6 31.6
RSS0477 chr1 28149508 8e-34 LG5 4.2
RSS0487 chr1 22213451 1e-67
RSS0489 chr1 6369539 1e-102 LG2 71.6
RSS0492 chr1 6611820 5e-76
RSS0496 chr1 20211941 5e-86 LG9 0.0
RSS0498 chr1 10760282 1e-42
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788


MarkerDB | Raphanus sativus