Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS2927 chr1 11629866 2e-85
RSS2930 chr1 11274382 2e-77
RSS2940 chr1 30157115 7e-48
RSS2941 chr1 17487503 4e-90
RSS2947 chr1 25029344 3e-89
RSS2950 chr1 20063623 6e-69
RSS2954 chr1 3656400 2e-62
RSS2958 chr1 25127862 5e-77 LG5 21.2
RSS2962 chr1 7705469 3e-48
RSS2969 chr1 7662635 2e-67
RSS2971 chr1 27087630 1e-121
RSS2976 chr1 6562198 1e-59
RSS2979 chr1 1493242 2e-39
RSS2980 chr1 29350305 1e-101
RSS2983 chr1 23556192 2e-57
RSS2992 chr1 574722 1e-40 LG3 65.2
RSS2998 chr1 6074013 3e-41
RSS3022 chr1 9156064 7e-37
RSS3031 chr1 5489362 1e-128
RSS3032 chr1 28241750 8e-47
RSS3033 chr1 25562217 1e-30
RSS3034 chr1 5956931 4e-21 LG7 21.3
RSS3036 chr1 30184893 4e-66
RSS3038 chr1 10716160 3e-70
RSS3040 chr1 2876852 4e-42
RSS3044 chr1 7646468 2e-85
RSS3047 chr1 28418899 4e-74
RSS3048 chr1 17661446 1e-34
RSS3050 chr1 6832827 3e-47
RSS3057 chr1 25366924 1e-116
RSS3058 chr1 28865615 2e-69
RSS3072 chr1 18359196 1e-61 LG3 101.7
RSS3075 chr1 3418132 5e-40
RSS3078 chr1 4985429 2e-62 LG7 19.3
RSS3081 chr1 25967792 9e-82
RSS3083 chr1 6268791 4e-88
RSS3084 chr1 29365216 5e-76
RSS3090 chr1 3848765 3e-46 LG9 61.1
RSS3091 chr1 28562009 2e-46 LG1 65.4
RSS3093 chr1 25677916 1e-100
RSS3100 chr1 18139900 2e-62
RSS3105 chr1 9973460 8e-84
RSS3133 chr1 48852 1e-100
RSS3134 chr1 23410677 4e-73
RSS3135 chr1 26000414 3e-72
RSS3143 chr1 30065772 1e-85
RSS3145 chr1 9431153 3e-50
RSS3157 chr1 8626604 3e-36
RSS3162 chr1 4500597 1e-117
RSS3163 chr1 2113422 5e-84
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788

MarkerDB | Raphanus sativus