Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS2386 chr1 29780032 3e-36
RSS2390 chr1 4519101 8e-93
RSS2396 chr1 17909426 2e-95
RSS2406 chr1 8558518 1e-96
RSS2420 chr1 19326099 1e-108
RSS2421 chr1 5075830 8e-74
RSS2430 chr1 10790564 5e-59
RSS2434 chr1 27541212 3e-58 LG7 22.2
RSS2436 chr1 1368688 3e-66
RSS2454 chr1 29136031 2e-73
RSS2460 chr1 6185011 5e-23 LG7 22.5
RSS2469 chr1 12551182 1e-25
RSS2470 chr1 1534179 2e-30
RSS2473 chr1 24937147 2e-23
RSS2478 chr1 11557169 7e-83
RSS2479 chr1 27765312 3e-40
RSS2481 chr1 5179677 2e-33
RSS2487 chr1 882606 2e-24 LG9 71.4
RSS2489 chr1 8605952 2e-42 LG7 31.7
RSS2490 chr1 28266719 3e-79
RSS2494 chr1 20976218 2e-56 LG9 5.0
RSS2501 chr1 12054031 8e-67
RSS2507 chr1 10278843 3e-31
RSS2517 chr1 28338277 7e-59
RSS2519 chr1 3986552 3e-61
RSS2523 chr1 7486683 1e-61
RSS2525 chr1 30059568 1e-56
RSS2526 chr1 27424443 6e-30
RSS2535 chr1 28547046 3e-47
RSS2536 chr1 7487476 6e-61
RSS2548 chr1 5401978 2e-41
RSS2549 chr1 8951703 2e-48
RSS2552 chr1 12590084 8e-82 LG9 15.4
RSS2570 chr1 5093280 1e-101
RSS2573 chr1 7768463 3e-79
RSS2574 chr1 27969292 1e-109
RSS2577 chr1 3465316 7e-66
RSS2578 chr1 7177416 2e-33
RSS2579 chr1 704274 4e-49
RSS2581 chr1 21074200 7e-48
RSS2585 chr1 27116542 2e-98
RSS2592 chr1 2883144 1e-115
RSS2605 chr1 620842 4e-52
RSS2606 chr1 7338900 2e-37
RSS2611 chr1 24400293 7e-79
RSS2613 chr1 20553852 7e-48 LG7 84.6
RSS2625 chr1 28835016 1e-58
RSS2632 chr1 6378560 1e-105
RSS2641 chr1 28546746 7e-56
RSS2642 chr1 24297784 2e-48
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788

MarkerDB | Raphanus sativus