Radish Marker Database

B. rapa genome (v1.2) list : A10

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 272


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0706 A10 5468804 6e-69 LG6 54.9
RSS0320 A10 5542037 1e-120
RSS1592 A10 5634749 5e-58 LG6 54.5
RSS0657 A10 5926858 1e-94
RSS2897 A10 6163852 8e-40
RSS0472 A10 6342183 3e-67
RSS0897 A10 6414170 3e-71 LG6 52.5
RSS3740 A10 6533937 1e-42
RSS3752 A10 6568311 3e-51
RSS2861 A10 6568312 7e-63
RSS2112 A10 6716590 1e-66 LG6 52.1
RSS1292 A10 6728803 3e-08
RSS2522 A10 7009462 1e-125
RSS0149 A10 7037047 6e-53
RSS0085 A10 7053524 5e-58
RSS0573 A10 7077522 1e-110
RSS2402 A10 7177460 5e-54
RSS1067 A10 7192225 8e-90
RSS1738 A10 7256364 3e-08
RSS3779 A10 7262169 2e-62
RSS0123 A10 7313237 4e-95
RSS1958 A10 7349440 1e-84
RSS3632 A10 7399736 4e-92
RSS0672 A10 7503106 2e-92
RSS0572 A10 7601337 1e-114
RSS1634 A10 7633596 1e-65
RSS3745 A10 7742399 1e-102
RSS0879 A10 7861411 2e-77
RSS1790 A10 7874440 2e-29 LG6 42.7
RSS0819 A10 8229658 1e-94
RSS3237 A10 8243398 2e-63
RSS3269 A10 8243398 5e-71
RSS2978 A10 8320294 1e-117
RSS3774 A10 8364480 8e-77
RSS3193 A10 8478663 2e-24
RSS1870 A10 8515153 7e-96 LG6 39.8
RSS3473 A10 8530202 4e-05
RSS2389 A10 8578373 8e-57
RSS2864 A10 8658109 1e-111
RSS1337 A10 8763031 1e-113 LG6 39.0
RSS3132 A10 8810577 1e-107
RSS2838 A10 8991885 4e-10
RSS3830 A10 9047056 4e-94 LG6 37.4
RSS0225 A10 9076547 1e-59 LG6 35.1
RSS1095 A10 9191341 3e-04 LG2 95.2
RSS2032 A10 9195917 3e-40
RSS1621 A10 9252864 1e-100
RSS2336 A10 9310352 3e-79
RSS1395 A10 9351645 2e-62 LG1 75.5
RSS0783 A10 9382556 1e-66
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 272


MarkerDB | Raphanus sativus