Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0953 A09 26940345 3e-43 LG1 21.2
RSS2724 A09 4116983 1e-87 LG2 34.1
RSS2881 A09 32547438 3e-48 LG2 65.1
RSS1178 A09 32927640 3e-80 LG2 70.4
RSS0489 A09 32860452 1e-119 LG2 71.6
RSS0494 A09 26141859 1e-101 LG2 82.5
RSS3864 A09 30858112 3e-57 LG2 96.4
RSS1020 A09 5047590 5e-42 LG2 104.3
RSS3405 A09 5048773 1e-100 LG2 104.3
RSS3937 A09 32024956 5e-48 LG2 106.3
RSS3082 A09 32329487 1e-117 LG2 111.8
RSS1973 A09 37033484 4e-86 LG3 64.1
RSS2992 A09 36750052 2e-64 LG3 65.2
RSS2090 A09 35971230 1e-97 LG3 69.2
RSS0810 A09 33655014 5e-76 LG3 70.8
RSS2831 A09 34949909 4e-96 LG3 73.4
RSS3043 A09 35152100 6e-90 LG3 73.7
RSS3324 A09 26347097 2e-33 LG3 76.3
RSS0769 A09 26764595 2e-72 LG3 77.2
RSS2970 A09 26747172 5e-29 LG3 77.4
RSS2089 A09 27059908 5e-63 LG3 78.6
RSS0068 A09 28048707 1e-48 LG3 82.3
RSS0866 A09 28061171 2e-78 LG3 83.7
RSS0193 A09 28312131 6e-26 LG3 86.6
RSS2249 A09 28319428 1e-13 LG3 86.7
RSS0154 A09 28885583 6e-59 LG3 87.6
RSS2974 A09 29139094 7e-90 LG3 90.5
RSS0574 A09 29177913 6e-72 LG3 90.5
RSS2188 A09 29493975 1e-82 LG3 91.4
RSS1195 A09 29583391 2e-50 LG3 91.8
RSS3666 A09 34578075 2e-60 LG3 95.8
RSS1955 A09 30319291 1e-73 LG3 97.3
RSS3250 A09 30338075 5e-87 LG3 98.1
RSS2310 A09 30780233 1e-57 LG3 100.0
RSS0192 A09 34745121 3e-93 LG3 110.4
RSS1421 A09 3462257 1e-42 LG3 124.9
RSS1537 A09 30663102 4e-58 LG4 1.3
RSS2126 A09 28318953 9e-46 LG4 4.0
RSS3897 A09 26326318 7e-58 LG4 7.1
RSS0375 A09 20066133 1e-33 LG4 9.3
RSS3234 A09 30796071 1e-105 LG4 52.5
RSS3515 A09 31336571 4e-80 LG4 57.1
RSS0178 A09 1510615 4e-90 LG4 110.0
RSS1971 A09 2884912 1e-84 LG4 113.0
RSS1249_a A09 25641684 4e-53 LG4 116.8
RSS3086 A09 21448200 4e-82 LG5 108.8
RSS2321 A09 6747878 6e-05 LG6 18.7
RSS1474 A09 998971 1e-100 LG6 81.1
RSS2466 A09 702297 1e-123 LG6 88.4
RSS1301 A09 1982997 1e-99 LG6 123.1
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus