Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1349 A09 88574 7e-61
RSS1522 A09 92026 4e-99
RSS0428 A09 151560 1e-146
RSS0820 A09 184483 7e-61
RSS0663 A09 185697 7e-70
RSS1333 A09 430184 3e-11
RSS2398 A09 430184 9e-11
RSS2201 A09 559079 1e-101
RSS0349 A09 560374 1e-14
RSS3478 A09 593162 9e-44
RSS2637 A09 622683 1e-129
RSS1280 A09 672000 9e-63
RSS2466 A09 702297 1e-123 LG6 88.4
RSS0732 A09 773360 1e-100
RSS3576 A09 773841 2e-87
RSS2023 A09 881004 6e-30
RSS1662 A09 943209 5e-48
RSS2959 A09 950243 8e-70
RSS1474 A09 998971 1e-100 LG6 81.1
RSS2051 A09 1032775 1e-109
RSS3027 A09 1098965 4e-53
RSS0070 A09 1111596 7e-78
RSS1399 A09 1151975 1e-107
RSS3813 A09 1167081 2e-37
RSS3988 A09 1189216 7e-36
RSS2345 A09 1209842 1e-123
RSS1347 A09 1285643 2e-70
RSS3116 A09 1318617 3e-77
RSS1857 A09 1339540 1e-137
RSS2347 A09 1485049 5e-63
RSS0178 A09 1510615 4e-90 LG4 110.0
RSS1923 A09 1539646 2e-79
RSS2229 A09 1547312 1e-103
RSS1351 A09 1548980 5e-70
RSS0540 A09 1562313 3e-07
RSS2388 A09 1562966 5e-43
RSS0397 A09 1564185 1e-88
RSS2185 A09 1569202 1e-114
RSS1723 A09 1600049 1e-146
RSS2199 A09 1611784 3e-41
RSS1606 A09 1666066 1e-06
RSS1217 A09 1669210 4e-15
RSS3959 A09 1841938 1e-119
RSS1301 A09 1982997 1e-99 LG6 123.1
RSS3127 A09 2043906 1e-115
RSS1228 A09 2065363 1e-103
RSS3275 A09 2144512 5e-95
RSS3469 A09 2145572 2e-74
RSS3220 A09 2174026 1e-82
RSS3900 A09 2240543 9e-93
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus