Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1165 A09 31065840 4e-48
RSS1230 A09 31148388 1e-123
RSS3140 A09 31215619 1e-133
RSS1667 A09 31281342 1e-117
RSS0951 A09 31310823 3e-69
RSS0240 A09 31335354 1e-118
RSS3515 A09 31336571 4e-80 LG4 57.1
RSS2438 A09 31350024 4e-30
RSS2518 A09 31373187 2e-92
RSS3650 A09 31375628 3e-85
RSS1556 A09 31382652 9e-66
RSS3670 A09 31388294 0.19
RSS0286 A09 31475506 1e-104
RSS1392 A09 31478209 2e-87
RSS2221 A09 31566010 3e-56
RSS0285 A09 31572650 1e-120
RSS0157 A09 31607564 1e-114
RSS4013 A09 31646857 4e-85
RSS3865 A09 31679910 9e-69
RSS3112 A09 31722009 3e-86
RSS3782 A09 31800428 8e-68
RSS2884 A09 31801533 1e-112
RSS3457 A09 31851857 3e-64
RSS3679 A09 31852706 9e-90
RSS3441 A09 31885284 6e-61
RSS1917 A09 31896454 6e-83
RSS3889 A09 31898167 1e-53
RSS2356 A09 31980558 2e-46
RSS1414 A09 31986579 5e-34
RSS2192 A09 31998795 2e-66
RSS3937 A09 32024956 5e-48 LG2 106.3
RSS3982 A09 32030108 1e-108
RSS3767 A09 32037953 5e-52
RSS4029 A09 32054999 1e-82
RSS2727 A09 32146564 3e-98
RSS0195 A09 32220157 2e-71
RSS3477 A09 32276004 1e-107
RSS3930 A09 32282642 2e-33
RSS3463 A09 32305459 5e-23
RSS0956 A09 32305958 3e-31
RSS2233 A09 32316238 4e-98
RSS3082 A09 32329487 1e-117 LG2 111.8
RSS1199 A09 32352867 1e-32
RSS3110 A09 32370337 1e-105
RSS2742 A09 32392287 6e-41
RSS3658 A09 32504116 5e-76
RSS2537 A09 32547224 1e-42
RSS2881 A09 32547438 3e-48 LG2 65.1
RSS0987 A09 32645341 9e-39 LG9 48.2
RSS0949 A09 32667271 5e-66
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus