Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3897 A09 26326318 7e-58 LG4 7.1
RSS3957 A09 26326384 1e-43
RSS2850 A09 26332947 1e-100
RSS3324 A09 26347097 2e-33 LG3 76.3
RSS1251 A09 26478193 5e-83
RSS1259 A09 26524329 5e-90
RSS0754 A09 26707219 1e-104
RSS2970 A09 26747172 5e-29 LG3 77.4
RSS0769 A09 26764595 2e-72 LG3 77.2
RSS0960 A09 26786366 2e-28
RSS0953 A09 26940345 3e-43 LG1 21.2
RSS2033 A09 26942969 2e-40
RSS3461 A09 26992792 3e-28
RSS0870 A09 27000134 2e-83
RSS2595 A09 27059908 1e-126
RSS2089 A09 27059908 5e-63 LG3 78.6
RSS0353 A09 27070484 4e-80
RSS0661 A09 27070754 4e-32
RSS3013 A09 27223639 1e-107
RSS3101 A09 27236770 6e-08
RSS0102 A09 27312514 4e-96
RSS2128 A09 27312514 1e-109
RSS1617 A09 27470543 6e-73
RSS3488 A09 27477858 6e-23
RSS1976 A09 27660490 1e-103
RSS2093 A09 27729266 6e-51
RSS0146 A09 27730586 2e-36
RSS2502 A09 27731158 3e-11
RSS1988 A09 27736687 1e-94
RSS0322 A09 27909159 2e-04
RSS0562 A09 27920992 7e-82
RSS2381 A09 28002401 7e-09
RSS2056 A09 28048707 6e-61
RSS0068 A09 28048707 1e-48 LG3 82.3
RSS0866 A09 28061171 2e-78 LG3 83.7
RSS2462 A09 28104796 2e-74
RSS2405 A09 28190369 8e-79
RSS0851 A09 28210855 8e-93
RSS2872 A09 28214173 6e-68
RSS2790 A09 28214542 2e-69
RSS0193 A09 28312131 6e-26 LG3 86.6
RSS2126 A09 28318953 9e-46 LG4 4.0
RSS2249 A09 28319428 1e-13 LG3 86.7
RSS2633 A09 28339514 1e-104
RSS0859 A09 28368752 1e-110
RSS3028 A09 28440277 1e-45
RSS3035 A09 28478930 3e-73
RSS2753 A09 28490738 1e-39
RSS0064 A09 28595128 7e-21
RSS0348 A09 28595297 1e-92
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517

MarkerDB | Raphanus sativus