Radish Marker Database

B. rapa genome (v1.2) list : A09

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 517


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0847 A09 4772256 5e-64
RSS1496 A09 4849791 1e-102
RSS0698 A09 4889786 3e-84
RSS0066 A09 4909427 1e-102 LG7 23.1
RSS2571 A09 4998422 1e-104
RSS1020 A09 5047590 5e-42 LG2 104.3
RSS3405 A09 5048773 1e-100 LG2 104.3
RSS0514 A09 5070329 8e-97
RSS3204 A09 5254596 2e-71
RSS4028 A09 5254596 2e-67
RSS0501 A09 5412885 1e-102
RSS3871 A09 5483613 1e-146
RSS3608 A09 5485716 1e-121
RSS1534 A09 5498630 2e-82
RSS3824 A09 5502217 5e-32
RSS3184 A09 5619987 3e-92
RSS0964 A09 5698103 4e-25
RSS1629 A09 6033803 3e-64
RSS2983 A09 6067505 2e-84
RSS1222 A09 6331109 5e-93
RSS3945 A09 6532031 4e-90
RSS2247 A09 6648209 4e-73
RSS3769 A09 6660049 4e-87
RSS0639 A09 6710098 1e-131
RSS2321 A09 6747878 6e-05 LG6 18.7
RSS0045 A09 7076076 1e-129
RSS0658 A09 7200920 1e-58
RSS3187 A09 7273801 4e-90
RSS0452 A09 7340773 1e-102
RSS3134 A09 7421083 5e-83
RSS2029 A09 7447181 3e-91
RSS0117 A09 7549576 3e-62
RSS1239 A09 7675558 3e-07
RSS2384 A09 7688122 1e-115
RSS0357 A09 7793894 7e-95
RSS0579 A09 7793912 1e-117
RSS2357 A09 7839491 8e-53
RSS2875 A09 7844970 2e-08
RSS3801 A09 8254751 3e-72
RSS2863 A09 8254787 3e-64
RSS3790 A09 8255258 1e-104
RSS1053 A09 8283682 2e-82
RSS2301 A09 8310685 5e-36
RSS0212 A09 8367473 1e-124
RSS1812 A09 8561981 2e-11
RSS3831 A09 8749663 1e-101
RSS0487 A09 8889869 5e-89
RSS2782 A09 9037909 1e-117
RSS0040 A09 9143348 1e-106
RSS2175 A09 9165210 2e-45
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 517


MarkerDB | Raphanus sativus