Radish Marker Database

B. rapa genome (v1.2) list : A08

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0008 A08 7712349 4e-39 LG4 75.7
RSS0015 A08 8491961 2e-72 LG7 79.3
RSS0027 A08 20616128 3e-27 LG7 15.1
RSS0037 A08 18649861 3e-41
RSS0042 A08 1860706 1e-89 LG7 84.1
RSS0071 A08 19542728 2e-68
RSS0073 A08 15700017 6e-63 LG7 41.6
RSS0073_a A08 15700017 6e-63 LG5 134.3
RSS0083 A08 15369079 6e-67
RSS0100 A08 700716 7e-76
RSS0101 A08 15312872 1e-69
RSS0145 A08 11500179 2e-77
RSS0147 A08 18650537 1e-29
RSS0161 A08 805959 1e-114
RSS0184 A08 16949830 1e-110
RSS0207 A08 19746551 1e-108
RSS0208 A08 16177689 1e-104
RSS0213 A08 18183512 2e-71
RSS0246 A08 12579472 6e-61
RSS0251 A08 15740612 2e-89 LG5 134.4
RSS0274 A08 13173991 8e-74
RSS0300 A08 19512100 1e-105
RSS0328 A08 14434201 8e-82
RSS0331 A08 15238542 9e-79 LG5 131.8
RSS0359 A08 14432251 2e-74
RSS0362 A08 17137498 1e-114
RSS0364 A08 11119710 3e-98
RSS0367 A08 16051301 6e-09
RSS0377 A08 15798296 6e-63
RSS0378 A08 11164947 1e-125
RSS0382 A08 16789025 9e-56 LG7 34.9
RSS0390 A08 20203784 2e-88
RSS0394 A08 20989744 9e-60
RSS0406 A08 19409253 2e-40 LG2 78.0
RSS0427 A08 8739371 4e-81
RSS0445 A08 13963820 1e-68 LG5 121.7
RSS0483 A08 9489510 4e-15
RSS0498 A08 16332428 5e-53
RSS0500 A08 19631463 1e-87
RSS0512 A08 18898537 7e-59
RSS0516 A08 889207 7e-81
RSS0520 A08 18349378 4e-85
RSS0544 A08 973554 7e-78
RSS0547 A08 16461829 3e-63
RSS0548 A08 2442393 2e-86
RSS0578 A08 18170029 2e-94
RSS0615 A08 13275346 4e-42 LG7 60.3
RSS0629 A08 15239986 3e-30
RSS0641 A08 11787577 1e-143
RSS0669 A08 13692476 1e-91
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

MarkerDB | Raphanus sativus