Radish Marker Database

B. rapa genome (v1.2) list : A08

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 282


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0500 A08 19631463 1e-87
RSS2818 A08 19691147 1e-126 LG4 8.1
RSS3564 A08 19708562 1e-113
RSS1157 A08 19735457 1e-115
RSS0207 A08 19746551 1e-108
RSS3179 A08 19789055 1e-66
RSS3273 A08 19808857 1e-88 LG7 16.9
RSS3696 A08 19814197 2e-40
RSS2157 A08 19821877 3e-61 LG7 17.1
RSS3583 A08 19867607 1e-69
RSS1297 A08 19878157 1e-68
RSS0948 A08 20203784 3e-86
RSS0390 A08 20203784 2e-88
RSS1151 A08 20205986 2e-85
RSS2275 A08 20367810 6e-12
RSS0896 A08 20469105 4e-82
RSS0027 A08 20616128 3e-27 LG7 15.1
RSS2648 A08 20669672 1e-59
RSS0996 A08 20769140 1e-129
RSS1525 A08 20916323 1e-105
RSS2355 A08 20970716 2e-70
RSS2085 A08 20989606 1e-52
RSS0394 A08 20989744 9e-60
RSS2746 A08 21008672 2e-72
RSS2037 A08 21017831 1e-93 LG9 69.2
RSS2286 A08 21210577 1e-96 LG7 13.3
RSS3203 A08 21292293 3e-34
RSS3293 A08 21311110 5e-78
RSS4032 A08 21347790 1e-35
RSS1350 A08 21484761 8e-75
RSS1722 A08 21520224 1e-28
RSS1110 A08 21565316 2e-90
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 282

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